Gene : Brara.C03060 B. rapa FPsc v1.3
Defline:  (1 of 47) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  3060
Name:  ? Brara.C03060 Secondary Identifier:  ? PAC:30616462
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03060 0.5kb upstream 0.5kb upstream 3677 true A03: 15567346-15571022 Brassica rapa FPsc
Brara.C03060 0.5kb upstream 0.5kb upstream 500 false A03: 15567346-15567845 Brassica rapa FPsc
Brara.C03060 0.5kb downstream 0.5kb downstream 3677 true A03: 15567846-15571522 Brassica rapa FPsc
Brara.C03060 0.5kb downstream 0.5kb downstream 500 false A03: 15571023-15571522 Brassica rapa FPsc
Brara.C03060 1.0kb upstream 1.0kb upstream 4177 true A03: 15566846-15571022 Brassica rapa FPsc
Brara.C03060 1.0kb upstream 1.0kb upstream 1000 false A03: 15566846-15567845 Brassica rapa FPsc
Brara.C03060 1.0kb downstream 1.0kb downstream 4177 true A03: 15567846-15572022 Brassica rapa FPsc
Brara.C03060 1.0kb downstream 1.0kb downstream 1000 false A03: 15571023-15572022 Brassica rapa FPsc
Brara.C03060 2.0kb upstream 2.0kb upstream 5177 true A03: 15565846-15571022 Brassica rapa FPsc
Brara.C03060 2.0kb upstream 2.0kb upstream 2000 false A03: 15565846-15567845 Brassica rapa FPsc
Brara.C03060 2.0kb downstream 2.0kb downstream 5177 true A03: 15567846-15573022 Brassica rapa FPsc
Brara.C03060 2.0kb downstream 2.0kb downstream 2000 false A03: 15571023-15573022 Brassica rapa FPsc
Brara.C03060 5.0kb upstream 5.0kb upstream 8177 true A03: 15562846-15571022 Brassica rapa FPsc
Brara.C03060 5.0kb upstream 5.0kb upstream 5000 false A03: 15562846-15567845 Brassica rapa FPsc
Brara.C03060 5.0kb downstream 5.0kb downstream 8177 true A03: 15567846-15576022 Brassica rapa FPsc
Brara.C03060 5.0kb downstream 5.0kb downstream 5000 false A03: 15571023-15576022 Brassica rapa FPsc
Brara.C03060 10.0kb upstream 10.0kb upstream 13177 true A03: 15557846-15571022 Brassica rapa FPsc
Brara.C03060 10.0kb upstream 10.0kb upstream 10000 false A03: 15557846-15567845 Brassica rapa FPsc
Brara.C03060 10.0kb downstream 10.0kb downstream 13177 true A03: 15567846-15581022 Brassica rapa FPsc
Brara.C03060 10.0kb downstream 10.0kb downstream 10000 false A03: 15571023-15581022 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377547 5261 Brassicaceae View MSA
123836717 5264 Brassicales-Malvales View MSA
124346447 5266 SBM View MSA
124250884 5268 Malvidae View MSA
124072231 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier