Gene : Brara.E03416 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR30345 - RIBOSE-5-PHOSPHATE ISOMERASE B Genomic Order:  3416
Name:  ? Brara.E03416 Secondary Identifier:  ? PAC:30626804
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CALVIN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc NONOXIPENT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PENTOSE-P-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03416 0.5kb upstream 0.5kb upstream 1832 true A05: 27250712-27252543 Brassica rapa FPsc
Brara.E03416 0.5kb upstream 0.5kb upstream 500 false A05: 27250712-27251211 Brassica rapa FPsc
Brara.E03416 0.5kb downstream 0.5kb downstream 1832 true A05: 27251212-27253043 Brassica rapa FPsc
Brara.E03416 0.5kb downstream 0.5kb downstream 500 false A05: 27252544-27253043 Brassica rapa FPsc
Brara.E03416 1.0kb upstream 1.0kb upstream 2332 true A05: 27250212-27252543 Brassica rapa FPsc
Brara.E03416 1.0kb upstream 1.0kb upstream 1000 false A05: 27250212-27251211 Brassica rapa FPsc
Brara.E03416 1.0kb downstream 1.0kb downstream 2332 true A05: 27251212-27253543 Brassica rapa FPsc
Brara.E03416 1.0kb downstream 1.0kb downstream 1000 false A05: 27252544-27253543 Brassica rapa FPsc
Brara.E03416 2.0kb upstream 2.0kb upstream 3332 true A05: 27249212-27252543 Brassica rapa FPsc
Brara.E03416 2.0kb upstream 2.0kb upstream 2000 false A05: 27249212-27251211 Brassica rapa FPsc
Brara.E03416 2.0kb downstream 2.0kb downstream 3332 true A05: 27251212-27254543 Brassica rapa FPsc
Brara.E03416 2.0kb downstream 2.0kb downstream 2000 false A05: 27252544-27254543 Brassica rapa FPsc
Brara.E03416 5.0kb upstream 5.0kb upstream 6332 true A05: 27246212-27252543 Brassica rapa FPsc
Brara.E03416 5.0kb upstream 5.0kb upstream 5000 false A05: 27246212-27251211 Brassica rapa FPsc
Brara.E03416 5.0kb downstream 5.0kb downstream 6332 true A05: 27251212-27257543 Brassica rapa FPsc
Brara.E03416 5.0kb downstream 5.0kb downstream 5000 false A05: 27252544-27257543 Brassica rapa FPsc
Brara.E03416 10.0kb upstream 10.0kb upstream 11332 true A05: 27241212-27252543 Brassica rapa FPsc
Brara.E03416 10.0kb upstream 10.0kb upstream 10000 false A05: 27241212-27251211 Brassica rapa FPsc
Brara.E03416 10.0kb downstream 10.0kb downstream 11332 true A05: 27251212-27262543 Brassica rapa FPsc
Brara.E03416 10.0kb downstream 10.0kb downstream 10000 false A05: 27252544-27262543 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378066 5261 Brassicaceae View MSA
123831184 5264 Brassicales-Malvales View MSA
124349311 5266 SBM View MSA
124244749 5268 Malvidae View MSA
124062390 5270 Rosid View MSA
123736544 5271 Pentapetalae View MSA
122789174 5272 Eudicot View MSA
122042906 5273 Angiosperm View MSA
121349668 5274 Embryophyte View MSA
123381392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier