Gene : Brara.F00172 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR32370:SF16 - NON-PHOTOTROPIC HYPOCOTYL-LIKE PROTEIN Genomic Order:  172
Name:  ? Brara.F00172 Secondary Identifier:  ? PAC:30627646
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00172 0.5kb upstream 0.5kb upstream 2607 true A06: 1060325-1062931 Brassica rapa FPsc
Brara.F00172 0.5kb upstream 0.5kb upstream 500 false A06: 1062432-1062931 Brassica rapa FPsc
Brara.F00172 0.5kb downstream 0.5kb downstream 2607 true A06: 1059825-1062431 Brassica rapa FPsc
Brara.F00172 0.5kb downstream 0.5kb downstream 500 false A06: 1059825-1060324 Brassica rapa FPsc
Brara.F00172 1.0kb upstream 1.0kb upstream 3107 true A06: 1060325-1063431 Brassica rapa FPsc
Brara.F00172 1.0kb upstream 1.0kb upstream 1000 false A06: 1062432-1063431 Brassica rapa FPsc
Brara.F00172 1.0kb downstream 1.0kb downstream 3107 true A06: 1059325-1062431 Brassica rapa FPsc
Brara.F00172 1.0kb downstream 1.0kb downstream 1000 false A06: 1059325-1060324 Brassica rapa FPsc
Brara.F00172 2.0kb upstream 2.0kb upstream 4107 true A06: 1060325-1064431 Brassica rapa FPsc
Brara.F00172 2.0kb upstream 2.0kb upstream 2000 false A06: 1062432-1064431 Brassica rapa FPsc
Brara.F00172 2.0kb downstream 2.0kb downstream 4107 true A06: 1058325-1062431 Brassica rapa FPsc
Brara.F00172 2.0kb downstream 2.0kb downstream 2000 false A06: 1058325-1060324 Brassica rapa FPsc
Brara.F00172 5.0kb upstream 5.0kb upstream 7107 true A06: 1060325-1067431 Brassica rapa FPsc
Brara.F00172 5.0kb upstream 5.0kb upstream 5000 false A06: 1062432-1067431 Brassica rapa FPsc
Brara.F00172 5.0kb downstream 5.0kb downstream 7107 true A06: 1055325-1062431 Brassica rapa FPsc
Brara.F00172 5.0kb downstream 5.0kb downstream 5000 false A06: 1055325-1060324 Brassica rapa FPsc
Brara.F00172 10.0kb upstream 10.0kb upstream 12107 true A06: 1060325-1072431 Brassica rapa FPsc
Brara.F00172 10.0kb upstream 10.0kb upstream 10000 false A06: 1062432-1072431 Brassica rapa FPsc
Brara.F00172 10.0kb downstream 10.0kb downstream 12107 true A06: 1050325-1062431 Brassica rapa FPsc
Brara.F00172 10.0kb downstream 10.0kb downstream 10000 false A06: 1050325-1060324 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368601 5261 Brassicaceae View MSA
123799617 5264 Brassicales-Malvales View MSA
124297119 5266 SBM View MSA
124250856 5268 Malvidae View MSA
124065820 5270 Rosid View MSA
123742198 5271 Pentapetalae View MSA
122787661 5272 Eudicot View MSA
122051145 5273 Angiosperm View MSA
121347829 5274 Embryophyte View MSA
123380647 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier