Gene : Brara.F00133 B. rapa FPsc v1.3
Defline:  (1 of 279) PF00847 - AP2 domain (AP2) Genomic Order:  133
Name:  ? Brara.F00133 Secondary Identifier:  ? PAC:30630169
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00133 0.5kb upstream 0.5kb upstream 1217 true A06: 832559-833775 Brassica rapa FPsc
Brara.F00133 0.5kb upstream 0.5kb upstream 500 false A06: 832559-833058 Brassica rapa FPsc
Brara.F00133 0.5kb downstream 0.5kb downstream 1217 true A06: 833059-834275 Brassica rapa FPsc
Brara.F00133 0.5kb downstream 0.5kb downstream 500 false A06: 833776-834275 Brassica rapa FPsc
Brara.F00133 1.0kb upstream 1.0kb upstream 1717 true A06: 832059-833775 Brassica rapa FPsc
Brara.F00133 1.0kb upstream 1.0kb upstream 1000 false A06: 832059-833058 Brassica rapa FPsc
Brara.F00133 1.0kb downstream 1.0kb downstream 1717 true A06: 833059-834775 Brassica rapa FPsc
Brara.F00133 1.0kb downstream 1.0kb downstream 1000 false A06: 833776-834775 Brassica rapa FPsc
Brara.F00133 2.0kb upstream 2.0kb upstream 2717 true A06: 831059-833775 Brassica rapa FPsc
Brara.F00133 2.0kb upstream 2.0kb upstream 2000 false A06: 831059-833058 Brassica rapa FPsc
Brara.F00133 2.0kb downstream 2.0kb downstream 2717 true A06: 833059-835775 Brassica rapa FPsc
Brara.F00133 2.0kb downstream 2.0kb downstream 2000 false A06: 833776-835775 Brassica rapa FPsc
Brara.F00133 5.0kb upstream 5.0kb upstream 5717 true A06: 828059-833775 Brassica rapa FPsc
Brara.F00133 5.0kb upstream 5.0kb upstream 5000 false A06: 828059-833058 Brassica rapa FPsc
Brara.F00133 5.0kb downstream 5.0kb downstream 5717 true A06: 833059-838775 Brassica rapa FPsc
Brara.F00133 5.0kb downstream 5.0kb downstream 5000 false A06: 833776-838775 Brassica rapa FPsc
Brara.F00133 10.0kb upstream 10.0kb upstream 10717 true A06: 823059-833775 Brassica rapa FPsc
Brara.F00133 10.0kb upstream 10.0kb upstream 10000 false A06: 823059-833058 Brassica rapa FPsc
Brara.F00133 10.0kb downstream 10.0kb downstream 10717 true A06: 833059-843775 Brassica rapa FPsc
Brara.F00133 10.0kb downstream 10.0kb downstream 10000 false A06: 833776-843775 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350645 5261 Brassicaceae Singleton cluster - no MSA
123789639 5264 Brassicales-Malvales Singleton cluster - no MSA
124287632 5266 SBM Singleton cluster - no MSA
124256064 5268 Malvidae View MSA
124073899 5270 Rosid View MSA
123750459 5271 Pentapetalae View MSA
122795578 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier