Gene : Brara.C03699 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN Genomic Order:  3699
Name:  ? Brara.C03699 Secondary Identifier:  ? PAC:30615337
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03699 0.5kb upstream 0.5kb upstream 1775 true A03: 19061116-19062890 Brassica rapa FPsc
Brara.C03699 0.5kb upstream 0.5kb upstream 500 false A03: 19062391-19062890 Brassica rapa FPsc
Brara.C03699 0.5kb downstream 0.5kb downstream 1775 true A03: 19060616-19062390 Brassica rapa FPsc
Brara.C03699 0.5kb downstream 0.5kb downstream 500 false A03: 19060616-19061115 Brassica rapa FPsc
Brara.C03699 1.0kb upstream 1.0kb upstream 2275 true A03: 19061116-19063390 Brassica rapa FPsc
Brara.C03699 1.0kb upstream 1.0kb upstream 1000 false A03: 19062391-19063390 Brassica rapa FPsc
Brara.C03699 1.0kb downstream 1.0kb downstream 2275 true A03: 19060116-19062390 Brassica rapa FPsc
Brara.C03699 1.0kb downstream 1.0kb downstream 1000 false A03: 19060116-19061115 Brassica rapa FPsc
Brara.C03699 2.0kb upstream 2.0kb upstream 3275 true A03: 19061116-19064390 Brassica rapa FPsc
Brara.C03699 2.0kb upstream 2.0kb upstream 2000 false A03: 19062391-19064390 Brassica rapa FPsc
Brara.C03699 2.0kb downstream 2.0kb downstream 3275 true A03: 19059116-19062390 Brassica rapa FPsc
Brara.C03699 2.0kb downstream 2.0kb downstream 2000 false A03: 19059116-19061115 Brassica rapa FPsc
Brara.C03699 5.0kb upstream 5.0kb upstream 6275 true A03: 19061116-19067390 Brassica rapa FPsc
Brara.C03699 5.0kb upstream 5.0kb upstream 5000 false A03: 19062391-19067390 Brassica rapa FPsc
Brara.C03699 5.0kb downstream 5.0kb downstream 6275 true A03: 19056116-19062390 Brassica rapa FPsc
Brara.C03699 5.0kb downstream 5.0kb downstream 5000 false A03: 19056116-19061115 Brassica rapa FPsc
Brara.C03699 10.0kb upstream 10.0kb upstream 11275 true A03: 19061116-19072390 Brassica rapa FPsc
Brara.C03699 10.0kb upstream 10.0kb upstream 10000 false A03: 19062391-19072390 Brassica rapa FPsc
Brara.C03699 10.0kb downstream 10.0kb downstream 11275 true A03: 19051116-19062390 Brassica rapa FPsc
Brara.C03699 10.0kb downstream 10.0kb downstream 10000 false A03: 19051116-19061115 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377515 5261 Brassicaceae View MSA
123841701 5264 Brassicales-Malvales View MSA
124351138 5266 SBM View MSA
124239746 5268 Malvidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier