Gene : Brara.C03517 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11353//PTHR11353:SF93 - CHAPERONIN Genomic Order:  3517
Name:  ? Brara.C03517 Secondary Identifier:  ? PAC:30615236
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03517 0.5kb upstream 0.5kb upstream 7422 true A03: 17867802-17875223 Brassica rapa FPsc
Brara.C03517 0.5kb upstream 0.5kb upstream 500 false A03: 17867802-17868301 Brassica rapa FPsc
Brara.C03517 0.5kb downstream 0.5kb downstream 7422 true A03: 17868302-17875723 Brassica rapa FPsc
Brara.C03517 0.5kb downstream 0.5kb downstream 500 false A03: 17875224-17875723 Brassica rapa FPsc
Brara.C03517 1.0kb upstream 1.0kb upstream 7922 true A03: 17867302-17875223 Brassica rapa FPsc
Brara.C03517 1.0kb upstream 1.0kb upstream 1000 false A03: 17867302-17868301 Brassica rapa FPsc
Brara.C03517 1.0kb downstream 1.0kb downstream 7922 true A03: 17868302-17876223 Brassica rapa FPsc
Brara.C03517 1.0kb downstream 1.0kb downstream 1000 false A03: 17875224-17876223 Brassica rapa FPsc
Brara.C03517 2.0kb upstream 2.0kb upstream 8922 true A03: 17866302-17875223 Brassica rapa FPsc
Brara.C03517 2.0kb upstream 2.0kb upstream 2000 false A03: 17866302-17868301 Brassica rapa FPsc
Brara.C03517 2.0kb downstream 2.0kb downstream 8922 true A03: 17868302-17877223 Brassica rapa FPsc
Brara.C03517 2.0kb downstream 2.0kb downstream 2000 false A03: 17875224-17877223 Brassica rapa FPsc
Brara.C03517 5.0kb upstream 5.0kb upstream 11922 true A03: 17863302-17875223 Brassica rapa FPsc
Brara.C03517 5.0kb upstream 5.0kb upstream 5000 false A03: 17863302-17868301 Brassica rapa FPsc
Brara.C03517 5.0kb downstream 5.0kb downstream 11922 true A03: 17868302-17880223 Brassica rapa FPsc
Brara.C03517 5.0kb downstream 5.0kb downstream 5000 false A03: 17875224-17880223 Brassica rapa FPsc
Brara.C03517 10.0kb upstream 10.0kb upstream 16922 true A03: 17858302-17875223 Brassica rapa FPsc
Brara.C03517 10.0kb upstream 10.0kb upstream 10000 false A03: 17858302-17868301 Brassica rapa FPsc
Brara.C03517 10.0kb downstream 10.0kb downstream 16922 true A03: 17868302-17885223 Brassica rapa FPsc
Brara.C03517 10.0kb downstream 10.0kb downstream 10000 false A03: 17875224-17885223 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374885 5261 Brassicaceae View MSA
123833424 5264 Brassicales-Malvales View MSA
124343385 5266 SBM View MSA
124251287 5268 Malvidae View MSA
124069910 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier