Gene : Brara.F00048 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR18896:SF79 - PHOSPHOLIPASE D EPSILON Genomic Order:  48
Name:  ? Brara.F00048 Secondary Identifier:  ? PAC:30630497
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPASYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7039 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00048 0.5kb upstream 0.5kb upstream 2934 true A06: 356722-359655 Brassica rapa FPsc
Brara.F00048 0.5kb upstream 0.5kb upstream 500 false A06: 356722-357221 Brassica rapa FPsc
Brara.F00048 0.5kb downstream 0.5kb downstream 2934 true A06: 357222-360155 Brassica rapa FPsc
Brara.F00048 0.5kb downstream 0.5kb downstream 500 false A06: 359656-360155 Brassica rapa FPsc
Brara.F00048 1.0kb upstream 1.0kb upstream 3434 true A06: 356222-359655 Brassica rapa FPsc
Brara.F00048 1.0kb upstream 1.0kb upstream 1000 false A06: 356222-357221 Brassica rapa FPsc
Brara.F00048 1.0kb downstream 1.0kb downstream 3434 true A06: 357222-360655 Brassica rapa FPsc
Brara.F00048 1.0kb downstream 1.0kb downstream 1000 false A06: 359656-360655 Brassica rapa FPsc
Brara.F00048 2.0kb upstream 2.0kb upstream 4434 true A06: 355222-359655 Brassica rapa FPsc
Brara.F00048 2.0kb upstream 2.0kb upstream 2000 false A06: 355222-357221 Brassica rapa FPsc
Brara.F00048 2.0kb downstream 2.0kb downstream 4434 true A06: 357222-361655 Brassica rapa FPsc
Brara.F00048 2.0kb downstream 2.0kb downstream 2000 false A06: 359656-361655 Brassica rapa FPsc
Brara.F00048 5.0kb upstream 5.0kb upstream 7434 true A06: 352222-359655 Brassica rapa FPsc
Brara.F00048 5.0kb upstream 5.0kb upstream 5000 false A06: 352222-357221 Brassica rapa FPsc
Brara.F00048 5.0kb downstream 5.0kb downstream 7434 true A06: 357222-364655 Brassica rapa FPsc
Brara.F00048 5.0kb downstream 5.0kb downstream 5000 false A06: 359656-364655 Brassica rapa FPsc
Brara.F00048 10.0kb upstream 10.0kb upstream 12434 true A06: 347222-359655 Brassica rapa FPsc
Brara.F00048 10.0kb upstream 10.0kb upstream 10000 false A06: 347222-357221 Brassica rapa FPsc
Brara.F00048 10.0kb downstream 10.0kb downstream 12434 true A06: 357222-369655 Brassica rapa FPsc
Brara.F00048 10.0kb downstream 10.0kb downstream 10000 false A06: 359656-369655 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361991 5261 Brassicaceae View MSA
123828918 5264 Brassicales-Malvales View MSA
124342668 5266 SBM View MSA
124242192 5268 Malvidae View MSA
124061086 5270 Rosid View MSA
123739430 5271 Pentapetalae View MSA
122786785 5272 Eudicot View MSA
122045742 5273 Angiosperm View MSA
121310493 5274 Embryophyte View MSA
123347963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier