Gene : Brara.C04265 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12866:SF2 - UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 Genomic Order:  4265
Name:  ? Brara.C04265 Secondary Identifier:  ? PAC:30616180
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04265 0.5kb upstream 0.5kb upstream 2606 true A03: 22469595-22472200 Brassica rapa FPsc
Brara.C04265 0.5kb upstream 0.5kb upstream 500 false A03: 22471701-22472200 Brassica rapa FPsc
Brara.C04265 0.5kb downstream 0.5kb downstream 2606 true A03: 22469095-22471700 Brassica rapa FPsc
Brara.C04265 0.5kb downstream 0.5kb downstream 500 false A03: 22469095-22469594 Brassica rapa FPsc
Brara.C04265 1.0kb upstream 1.0kb upstream 3106 true A03: 22469595-22472700 Brassica rapa FPsc
Brara.C04265 1.0kb upstream 1.0kb upstream 1000 false A03: 22471701-22472700 Brassica rapa FPsc
Brara.C04265 1.0kb downstream 1.0kb downstream 3106 true A03: 22468595-22471700 Brassica rapa FPsc
Brara.C04265 1.0kb downstream 1.0kb downstream 1000 false A03: 22468595-22469594 Brassica rapa FPsc
Brara.C04265 2.0kb upstream 2.0kb upstream 4106 true A03: 22469595-22473700 Brassica rapa FPsc
Brara.C04265 2.0kb upstream 2.0kb upstream 2000 false A03: 22471701-22473700 Brassica rapa FPsc
Brara.C04265 2.0kb downstream 2.0kb downstream 4106 true A03: 22467595-22471700 Brassica rapa FPsc
Brara.C04265 2.0kb downstream 2.0kb downstream 2000 false A03: 22467595-22469594 Brassica rapa FPsc
Brara.C04265 5.0kb upstream 5.0kb upstream 7106 true A03: 22469595-22476700 Brassica rapa FPsc
Brara.C04265 5.0kb upstream 5.0kb upstream 5000 false A03: 22471701-22476700 Brassica rapa FPsc
Brara.C04265 5.0kb downstream 5.0kb downstream 7106 true A03: 22464595-22471700 Brassica rapa FPsc
Brara.C04265 5.0kb downstream 5.0kb downstream 5000 false A03: 22464595-22469594 Brassica rapa FPsc
Brara.C04265 10.0kb upstream 10.0kb upstream 12106 true A03: 22469595-22481700 Brassica rapa FPsc
Brara.C04265 10.0kb upstream 10.0kb upstream 10000 false A03: 22471701-22481700 Brassica rapa FPsc
Brara.C04265 10.0kb downstream 10.0kb downstream 12106 true A03: 22459595-22471700 Brassica rapa FPsc
Brara.C04265 10.0kb downstream 10.0kb downstream 10000 false A03: 22459595-22469594 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369043 5261 Brassicaceae View MSA
123831045 5264 Brassicales-Malvales View MSA
124350961 5266 SBM View MSA
124242414 5268 Malvidae View MSA
124064028 5270 Rosid View MSA
123743996 5271 Pentapetalae View MSA
122789041 5272 Eudicot View MSA
122041877 5273 Angiosperm View MSA
121349462 5274 Embryophyte View MSA
123426307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier