Gene : Brara.F00393 B. rapa FPsc v1.3

Defline:  (1 of 7) PTHR33527:SF4 - F13F21.27 PROTEIN-RELATED Genomic Order:  393
Name:  ? Brara.F00393 Secondary Identifier:  ? PAC:30629145

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00393 0.5kb upstream 0.5kb upstream 1875 true A06: 2321664-2323538 Brassica rapa FPsc
Brara.F00393 0.5kb upstream 0.5kb upstream 500 false A06: 2323039-2323538 Brassica rapa FPsc
Brara.F00393 0.5kb downstream 0.5kb downstream 1875 true A06: 2321164-2323038 Brassica rapa FPsc
Brara.F00393 0.5kb downstream 0.5kb downstream 500 false A06: 2321164-2321663 Brassica rapa FPsc
Brara.F00393 1.0kb upstream 1.0kb upstream 2375 true A06: 2321664-2324038 Brassica rapa FPsc
Brara.F00393 1.0kb upstream 1.0kb upstream 1000 false A06: 2323039-2324038 Brassica rapa FPsc
Brara.F00393 1.0kb downstream 1.0kb downstream 2375 true A06: 2320664-2323038 Brassica rapa FPsc
Brara.F00393 1.0kb downstream 1.0kb downstream 1000 false A06: 2320664-2321663 Brassica rapa FPsc
Brara.F00393 2.0kb upstream 2.0kb upstream 3375 true A06: 2321664-2325038 Brassica rapa FPsc
Brara.F00393 2.0kb upstream 2.0kb upstream 2000 false A06: 2323039-2325038 Brassica rapa FPsc
Brara.F00393 2.0kb downstream 2.0kb downstream 3375 true A06: 2319664-2323038 Brassica rapa FPsc
Brara.F00393 2.0kb downstream 2.0kb downstream 2000 false A06: 2319664-2321663 Brassica rapa FPsc
Brara.F00393 5.0kb upstream 5.0kb upstream 6375 true A06: 2321664-2328038 Brassica rapa FPsc
Brara.F00393 5.0kb upstream 5.0kb upstream 5000 false A06: 2323039-2328038 Brassica rapa FPsc
Brara.F00393 5.0kb downstream 5.0kb downstream 6375 true A06: 2316664-2323038 Brassica rapa FPsc
Brara.F00393 5.0kb downstream 5.0kb downstream 5000 false A06: 2316664-2321663 Brassica rapa FPsc
Brara.F00393 10.0kb upstream 10.0kb upstream 11375 true A06: 2321664-2333038 Brassica rapa FPsc
Brara.F00393 10.0kb upstream 10.0kb upstream 10000 false A06: 2323039-2333038 Brassica rapa FPsc
Brara.F00393 10.0kb downstream 10.0kb downstream 11375 true A06: 2311664-2323038 Brassica rapa FPsc
Brara.F00393 10.0kb downstream 10.0kb downstream 10000 false A06: 2311664-2321663 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350436 5261 Brassicaceae Singleton cluster - no MSA
123789465 5264 Brassicales-Malvales Singleton cluster - no MSA
124287463 5266 SBM Singleton cluster - no MSA
124141141 5268 Malvidae Singleton cluster - no MSA
124068831 5270 Rosid View MSA
123747236 5271 Pentapetalae View MSA
122796366 5272 Eudicot View MSA
122048138 5273 Angiosperm View MSA
121310860 5274 Embryophyte View MSA
123348244 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier