Gene : Brara.C04182 B. rapa FPsc v1.3
Defline:  (1 of 6) 6.2.1.5 - Succinate--CoA ligase (ADP-forming) / Succinyl-CoA synthetase (ADP-forming) Genomic Order:  4182
Name:  ? Brara.C04182 Secondary Identifier:  ? PAC:30616581
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5690 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04182 0.5kb upstream 0.5kb upstream 2958 true A03: 22015813-22018770 Brassica rapa FPsc
Brara.C04182 0.5kb upstream 0.5kb upstream 500 false A03: 22018271-22018770 Brassica rapa FPsc
Brara.C04182 0.5kb downstream 0.5kb downstream 2958 true A03: 22015313-22018270 Brassica rapa FPsc
Brara.C04182 0.5kb downstream 0.5kb downstream 500 false A03: 22015313-22015812 Brassica rapa FPsc
Brara.C04182 1.0kb upstream 1.0kb upstream 3458 true A03: 22015813-22019270 Brassica rapa FPsc
Brara.C04182 1.0kb upstream 1.0kb upstream 1000 false A03: 22018271-22019270 Brassica rapa FPsc
Brara.C04182 1.0kb downstream 1.0kb downstream 3458 true A03: 22014813-22018270 Brassica rapa FPsc
Brara.C04182 1.0kb downstream 1.0kb downstream 1000 false A03: 22014813-22015812 Brassica rapa FPsc
Brara.C04182 2.0kb upstream 2.0kb upstream 4458 true A03: 22015813-22020270 Brassica rapa FPsc
Brara.C04182 2.0kb upstream 2.0kb upstream 2000 false A03: 22018271-22020270 Brassica rapa FPsc
Brara.C04182 2.0kb downstream 2.0kb downstream 4458 true A03: 22013813-22018270 Brassica rapa FPsc
Brara.C04182 2.0kb downstream 2.0kb downstream 2000 false A03: 22013813-22015812 Brassica rapa FPsc
Brara.C04182 5.0kb upstream 5.0kb upstream 7458 true A03: 22015813-22023270 Brassica rapa FPsc
Brara.C04182 5.0kb upstream 5.0kb upstream 5000 false A03: 22018271-22023270 Brassica rapa FPsc
Brara.C04182 5.0kb downstream 5.0kb downstream 7458 true A03: 22010813-22018270 Brassica rapa FPsc
Brara.C04182 5.0kb downstream 5.0kb downstream 5000 false A03: 22010813-22015812 Brassica rapa FPsc
Brara.C04182 10.0kb upstream 10.0kb upstream 12458 true A03: 22015813-22028270 Brassica rapa FPsc
Brara.C04182 10.0kb upstream 10.0kb upstream 10000 false A03: 22018271-22028270 Brassica rapa FPsc
Brara.C04182 10.0kb downstream 10.0kb downstream 12458 true A03: 22005813-22018270 Brassica rapa FPsc
Brara.C04182 10.0kb downstream 10.0kb downstream 10000 false A03: 22005813-22015812 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377125 5261 Brassicaceae View MSA
123837758 5264 Brassicales-Malvales View MSA
124342253 5266 SBM View MSA
124250817 5268 Malvidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier