Gene : Brara.C03918 B. rapa FPsc v1.3
Defline:  (1 of 6) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  3918
Name:  ? Brara.C03918 Secondary Identifier:  ? PAC:30619314
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4942 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03918 0.5kb upstream 0.5kb upstream 6248 true A03: 20359586-20365833 Brassica rapa FPsc
Brara.C03918 0.5kb upstream 0.5kb upstream 500 false A03: 20359586-20360085 Brassica rapa FPsc
Brara.C03918 0.5kb downstream 0.5kb downstream 6248 true A03: 20360086-20366333 Brassica rapa FPsc
Brara.C03918 0.5kb downstream 0.5kb downstream 500 false A03: 20365834-20366333 Brassica rapa FPsc
Brara.C03918 1.0kb upstream 1.0kb upstream 6748 true A03: 20359086-20365833 Brassica rapa FPsc
Brara.C03918 1.0kb upstream 1.0kb upstream 1000 false A03: 20359086-20360085 Brassica rapa FPsc
Brara.C03918 1.0kb downstream 1.0kb downstream 6748 true A03: 20360086-20366833 Brassica rapa FPsc
Brara.C03918 1.0kb downstream 1.0kb downstream 1000 false A03: 20365834-20366833 Brassica rapa FPsc
Brara.C03918 2.0kb upstream 2.0kb upstream 7748 true A03: 20358086-20365833 Brassica rapa FPsc
Brara.C03918 2.0kb upstream 2.0kb upstream 2000 false A03: 20358086-20360085 Brassica rapa FPsc
Brara.C03918 2.0kb downstream 2.0kb downstream 7748 true A03: 20360086-20367833 Brassica rapa FPsc
Brara.C03918 2.0kb downstream 2.0kb downstream 2000 false A03: 20365834-20367833 Brassica rapa FPsc
Brara.C03918 5.0kb upstream 5.0kb upstream 10748 true A03: 20355086-20365833 Brassica rapa FPsc
Brara.C03918 5.0kb upstream 5.0kb upstream 5000 false A03: 20355086-20360085 Brassica rapa FPsc
Brara.C03918 5.0kb downstream 5.0kb downstream 10748 true A03: 20360086-20370833 Brassica rapa FPsc
Brara.C03918 5.0kb downstream 5.0kb downstream 5000 false A03: 20365834-20370833 Brassica rapa FPsc
Brara.C03918 10.0kb upstream 10.0kb upstream 15748 true A03: 20350086-20365833 Brassica rapa FPsc
Brara.C03918 10.0kb upstream 10.0kb upstream 10000 false A03: 20350086-20360085 Brassica rapa FPsc
Brara.C03918 10.0kb downstream 10.0kb downstream 15748 true A03: 20360086-20375833 Brassica rapa FPsc
Brara.C03918 10.0kb downstream 10.0kb downstream 10000 false A03: 20365834-20375833 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122359810 5261 Brassicaceae View MSA
123797645 5264 Brassicales-Malvales View MSA
124295363 5266 SBM View MSA
124251387 5268 Malvidae View MSA
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier