Gene : Brara.C03950 B. rapa FPsc v1.3
Defline:  (1 of 1) PF11416 - Syntaxin-5 N-terminal, Sly1p-binding domain (Syntaxin-5_N) Genomic Order:  3950
Name:  ? Brara.C03950 Secondary Identifier:  ? PAC:30619413
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03950 0.5kb upstream 0.5kb upstream 2760 true A03: 20566252-20569011 Brassica rapa FPsc
Brara.C03950 0.5kb upstream 0.5kb upstream 500 false A03: 20566252-20566751 Brassica rapa FPsc
Brara.C03950 0.5kb downstream 0.5kb downstream 2760 true A03: 20566752-20569511 Brassica rapa FPsc
Brara.C03950 0.5kb downstream 0.5kb downstream 500 false A03: 20569012-20569511 Brassica rapa FPsc
Brara.C03950 1.0kb upstream 1.0kb upstream 3260 true A03: 20565752-20569011 Brassica rapa FPsc
Brara.C03950 1.0kb upstream 1.0kb upstream 1000 false A03: 20565752-20566751 Brassica rapa FPsc
Brara.C03950 1.0kb downstream 1.0kb downstream 3260 true A03: 20566752-20570011 Brassica rapa FPsc
Brara.C03950 1.0kb downstream 1.0kb downstream 1000 false A03: 20569012-20570011 Brassica rapa FPsc
Brara.C03950 2.0kb upstream 2.0kb upstream 4260 true A03: 20564752-20569011 Brassica rapa FPsc
Brara.C03950 2.0kb upstream 2.0kb upstream 2000 false A03: 20564752-20566751 Brassica rapa FPsc
Brara.C03950 2.0kb downstream 2.0kb downstream 4260 true A03: 20566752-20571011 Brassica rapa FPsc
Brara.C03950 2.0kb downstream 2.0kb downstream 2000 false A03: 20569012-20571011 Brassica rapa FPsc
Brara.C03950 5.0kb upstream 5.0kb upstream 7260 true A03: 20561752-20569011 Brassica rapa FPsc
Brara.C03950 5.0kb upstream 5.0kb upstream 5000 false A03: 20561752-20566751 Brassica rapa FPsc
Brara.C03950 5.0kb downstream 5.0kb downstream 7260 true A03: 20566752-20574011 Brassica rapa FPsc
Brara.C03950 5.0kb downstream 5.0kb downstream 5000 false A03: 20569012-20574011 Brassica rapa FPsc
Brara.C03950 10.0kb upstream 10.0kb upstream 12260 true A03: 20556752-20569011 Brassica rapa FPsc
Brara.C03950 10.0kb upstream 10.0kb upstream 10000 false A03: 20556752-20566751 Brassica rapa FPsc
Brara.C03950 10.0kb downstream 10.0kb downstream 12260 true A03: 20566752-20579011 Brassica rapa FPsc
Brara.C03950 10.0kb downstream 10.0kb downstream 10000 false A03: 20569012-20579011 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376826 5261 Brassicaceae View MSA
123829076 5264 Brassicales-Malvales View MSA
124351306 5266 SBM View MSA
124241378 5268 Malvidae View MSA
124069963 5270 Rosid View MSA
123741703 5271 Pentapetalae View MSA
122789258 5272 Eudicot View MSA
122042790 5273 Angiosperm View MSA
121345451 5274 Embryophyte View MSA
123424461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier