Gene : Brara.D00031 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  31
Name:  ? Brara.D00031 Secondary Identifier:  ? PAC:30622620
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc DETOX1-PWY-1 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00031 0.5kb upstream 0.5kb upstream 2240 true A04: 184142-186381 Brassica rapa FPsc
Brara.D00031 0.5kb upstream 0.5kb upstream 500 false A04: 185882-186381 Brassica rapa FPsc
Brara.D00031 0.5kb downstream 0.5kb downstream 2240 true A04: 183642-185881 Brassica rapa FPsc
Brara.D00031 0.5kb downstream 0.5kb downstream 500 false A04: 183642-184141 Brassica rapa FPsc
Brara.D00031 1.0kb upstream 1.0kb upstream 2740 true A04: 184142-186881 Brassica rapa FPsc
Brara.D00031 1.0kb upstream 1.0kb upstream 1000 false A04: 185882-186881 Brassica rapa FPsc
Brara.D00031 1.0kb downstream 1.0kb downstream 2740 true A04: 183142-185881 Brassica rapa FPsc
Brara.D00031 1.0kb downstream 1.0kb downstream 1000 false A04: 183142-184141 Brassica rapa FPsc
Brara.D00031 2.0kb upstream 2.0kb upstream 3740 true A04: 184142-187881 Brassica rapa FPsc
Brara.D00031 2.0kb upstream 2.0kb upstream 2000 false A04: 185882-187881 Brassica rapa FPsc
Brara.D00031 2.0kb downstream 2.0kb downstream 3740 true A04: 182142-185881 Brassica rapa FPsc
Brara.D00031 2.0kb downstream 2.0kb downstream 2000 false A04: 182142-184141 Brassica rapa FPsc
Brara.D00031 5.0kb upstream 5.0kb upstream 6740 true A04: 184142-190881 Brassica rapa FPsc
Brara.D00031 5.0kb upstream 5.0kb upstream 5000 false A04: 185882-190881 Brassica rapa FPsc
Brara.D00031 5.0kb downstream 5.0kb downstream 6740 true A04: 179142-185881 Brassica rapa FPsc
Brara.D00031 5.0kb downstream 5.0kb downstream 5000 false A04: 179142-184141 Brassica rapa FPsc
Brara.D00031 10.0kb upstream 10.0kb upstream 11740 true A04: 184142-195881 Brassica rapa FPsc
Brara.D00031 10.0kb upstream 10.0kb upstream 10000 false A04: 185882-195881 Brassica rapa FPsc
Brara.D00031 10.0kb downstream 10.0kb downstream 11740 true A04: 174142-185881 Brassica rapa FPsc
Brara.D00031 10.0kb downstream 10.0kb downstream 10000 false A04: 174142-184141 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
122348914 5261 Brassicaceae Singleton cluster - no MSA
123788175 5264 Brassicales-Malvales Singleton cluster - no MSA
124286213 5266 SBM Singleton cluster - no MSA
124140127 5268 Malvidae Singleton cluster - no MSA
123867402 5270 Rosid Singleton cluster - no MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier