Gene : Brara.D00044 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR10168:SF81 - MONOTHIOL GLUTAREDOXIN-S1-RELATED Genomic Order:  44
Name:  ? Brara.D00044 Secondary Identifier:  ? PAC:30621505
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc THIOREDOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00044 0.5kb upstream 0.5kb upstream 809 true A04: 294887-295695 Brassica rapa FPsc
Brara.D00044 0.5kb upstream 0.5kb upstream 500 false A04: 294887-295386 Brassica rapa FPsc
Brara.D00044 0.5kb downstream 0.5kb downstream 809 true A04: 295387-296195 Brassica rapa FPsc
Brara.D00044 0.5kb downstream 0.5kb downstream 500 false A04: 295696-296195 Brassica rapa FPsc
Brara.D00044 1.0kb upstream 1.0kb upstream 1309 true A04: 294387-295695 Brassica rapa FPsc
Brara.D00044 1.0kb upstream 1.0kb upstream 1000 false A04: 294387-295386 Brassica rapa FPsc
Brara.D00044 1.0kb downstream 1.0kb downstream 1309 true A04: 295387-296695 Brassica rapa FPsc
Brara.D00044 1.0kb downstream 1.0kb downstream 1000 false A04: 295696-296695 Brassica rapa FPsc
Brara.D00044 2.0kb upstream 2.0kb upstream 2309 true A04: 293387-295695 Brassica rapa FPsc
Brara.D00044 2.0kb upstream 2.0kb upstream 2000 false A04: 293387-295386 Brassica rapa FPsc
Brara.D00044 2.0kb downstream 2.0kb downstream 2309 true A04: 295387-297695 Brassica rapa FPsc
Brara.D00044 2.0kb downstream 2.0kb downstream 2000 false A04: 295696-297695 Brassica rapa FPsc
Brara.D00044 5.0kb upstream 5.0kb upstream 5309 true A04: 290387-295695 Brassica rapa FPsc
Brara.D00044 5.0kb upstream 5.0kb upstream 5000 false A04: 290387-295386 Brassica rapa FPsc
Brara.D00044 5.0kb downstream 5.0kb downstream 5309 true A04: 295387-300695 Brassica rapa FPsc
Brara.D00044 5.0kb downstream 5.0kb downstream 5000 false A04: 295696-300695 Brassica rapa FPsc
Brara.D00044 10.0kb upstream 10.0kb upstream 10309 true A04: 285387-295695 Brassica rapa FPsc
Brara.D00044 10.0kb upstream 10.0kb upstream 10000 false A04: 285387-295386 Brassica rapa FPsc
Brara.D00044 10.0kb downstream 10.0kb downstream 10309 true A04: 295387-305695 Brassica rapa FPsc
Brara.D00044 10.0kb downstream 10.0kb downstream 10000 false A04: 295696-305695 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348631 5261 Brassicaceae Singleton cluster - no MSA
123787942 5264 Brassicales-Malvales Singleton cluster - no MSA
124285992 5266 SBM Singleton cluster - no MSA
124251213 5268 Malvidae View MSA
124070474 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier