Gene : Brara.D00066 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR24067//PTHR24067:SF112 - UBIQUITIN-CONJUGATING ENZYME E2 Genomic Order:  66
Name:  ? Brara.D00066 Secondary Identifier:  ? PAC:30621208
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00066 0.5kb upstream 0.5kb upstream 2025 true A04: 400303-402327 Brassica rapa FPsc
Brara.D00066 0.5kb upstream 0.5kb upstream 500 false A04: 400303-400802 Brassica rapa FPsc
Brara.D00066 0.5kb downstream 0.5kb downstream 2025 true A04: 400803-402827 Brassica rapa FPsc
Brara.D00066 0.5kb downstream 0.5kb downstream 500 false A04: 402328-402827 Brassica rapa FPsc
Brara.D00066 1.0kb upstream 1.0kb upstream 2525 true A04: 399803-402327 Brassica rapa FPsc
Brara.D00066 1.0kb upstream 1.0kb upstream 1000 false A04: 399803-400802 Brassica rapa FPsc
Brara.D00066 1.0kb downstream 1.0kb downstream 2525 true A04: 400803-403327 Brassica rapa FPsc
Brara.D00066 1.0kb downstream 1.0kb downstream 1000 false A04: 402328-403327 Brassica rapa FPsc
Brara.D00066 2.0kb upstream 2.0kb upstream 3525 true A04: 398803-402327 Brassica rapa FPsc
Brara.D00066 2.0kb upstream 2.0kb upstream 2000 false A04: 398803-400802 Brassica rapa FPsc
Brara.D00066 2.0kb downstream 2.0kb downstream 3525 true A04: 400803-404327 Brassica rapa FPsc
Brara.D00066 2.0kb downstream 2.0kb downstream 2000 false A04: 402328-404327 Brassica rapa FPsc
Brara.D00066 5.0kb upstream 5.0kb upstream 6525 true A04: 395803-402327 Brassica rapa FPsc
Brara.D00066 5.0kb upstream 5.0kb upstream 5000 false A04: 395803-400802 Brassica rapa FPsc
Brara.D00066 5.0kb downstream 5.0kb downstream 6525 true A04: 400803-407327 Brassica rapa FPsc
Brara.D00066 5.0kb downstream 5.0kb downstream 5000 false A04: 402328-407327 Brassica rapa FPsc
Brara.D00066 10.0kb upstream 10.0kb upstream 11525 true A04: 390803-402327 Brassica rapa FPsc
Brara.D00066 10.0kb upstream 10.0kb upstream 10000 false A04: 390803-400802 Brassica rapa FPsc
Brara.D00066 10.0kb downstream 10.0kb downstream 11525 true A04: 400803-412327 Brassica rapa FPsc
Brara.D00066 10.0kb downstream 10.0kb downstream 10000 false A04: 402328-412327 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122359918 5261 Brassicaceae View MSA
123797726 5264 Brassicales-Malvales View MSA
124295438 5266 SBM View MSA
124250468 5268 Malvidae View MSA
124051387 5270 Rosid View MSA
123752891 5271 Pentapetalae View MSA
122794655 5272 Eudicot View MSA
122047112 5273 Angiosperm View MSA
121344973 5274 Embryophyte View MSA
123425853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier