Gene : Brara.C04496 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11514:SF53 - TRANSCRIPTION FACTOR BHLH3 Genomic Order:  4496
Name:  ? Brara.C04496 Secondary Identifier:  ? PAC:30617449
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04496 0.5kb upstream 0.5kb upstream 1850 true A03: 23709604-23711453 Brassica rapa FPsc
Brara.C04496 0.5kb upstream 0.5kb upstream 500 false A03: 23709604-23710103 Brassica rapa FPsc
Brara.C04496 0.5kb downstream 0.5kb downstream 1850 true A03: 23710104-23711953 Brassica rapa FPsc
Brara.C04496 0.5kb downstream 0.5kb downstream 500 false A03: 23711454-23711953 Brassica rapa FPsc
Brara.C04496 1.0kb upstream 1.0kb upstream 2350 true A03: 23709104-23711453 Brassica rapa FPsc
Brara.C04496 1.0kb upstream 1.0kb upstream 1000 false A03: 23709104-23710103 Brassica rapa FPsc
Brara.C04496 1.0kb downstream 1.0kb downstream 2350 true A03: 23710104-23712453 Brassica rapa FPsc
Brara.C04496 1.0kb downstream 1.0kb downstream 1000 false A03: 23711454-23712453 Brassica rapa FPsc
Brara.C04496 2.0kb upstream 2.0kb upstream 3350 true A03: 23708104-23711453 Brassica rapa FPsc
Brara.C04496 2.0kb upstream 2.0kb upstream 2000 false A03: 23708104-23710103 Brassica rapa FPsc
Brara.C04496 2.0kb downstream 2.0kb downstream 3350 true A03: 23710104-23713453 Brassica rapa FPsc
Brara.C04496 2.0kb downstream 2.0kb downstream 2000 false A03: 23711454-23713453 Brassica rapa FPsc
Brara.C04496 5.0kb upstream 5.0kb upstream 6350 true A03: 23705104-23711453 Brassica rapa FPsc
Brara.C04496 5.0kb upstream 5.0kb upstream 5000 false A03: 23705104-23710103 Brassica rapa FPsc
Brara.C04496 5.0kb downstream 5.0kb downstream 6350 true A03: 23710104-23716453 Brassica rapa FPsc
Brara.C04496 5.0kb downstream 5.0kb downstream 5000 false A03: 23711454-23716453 Brassica rapa FPsc
Brara.C04496 10.0kb upstream 10.0kb upstream 11350 true A03: 23700104-23711453 Brassica rapa FPsc
Brara.C04496 10.0kb upstream 10.0kb upstream 10000 false A03: 23700104-23710103 Brassica rapa FPsc
Brara.C04496 10.0kb downstream 10.0kb downstream 11350 true A03: 23710104-23721453 Brassica rapa FPsc
Brara.C04496 10.0kb downstream 10.0kb downstream 10000 false A03: 23711454-23721453 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347499 5261 Brassicaceae Singleton cluster - no MSA
123787013 5264 Brassicales-Malvales Singleton cluster - no MSA
124285101 5266 SBM Singleton cluster - no MSA
124139185 5268 Malvidae Singleton cluster - no MSA
124062097 5270 Rosid View MSA
123736718 5271 Pentapetalae View MSA
122790494 5272 Eudicot View MSA
122049389 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier