Gene : Brara.F00540 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10694//PTHR10694:SF53 - JUMONJI DOMAIN CONTAINING PROTEIN Genomic Order:  540
Name:  ? Brara.F00540 Secondary Identifier:  ? PAC:30631041
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00540 0.5kb upstream 0.5kb upstream 5739 true A06: 3217908-3223646 Brassica rapa FPsc
Brara.F00540 0.5kb upstream 0.5kb upstream 500 false A06: 3217908-3218407 Brassica rapa FPsc
Brara.F00540 0.5kb downstream 0.5kb downstream 5739 true A06: 3218408-3224146 Brassica rapa FPsc
Brara.F00540 0.5kb downstream 0.5kb downstream 500 false A06: 3223647-3224146 Brassica rapa FPsc
Brara.F00540 1.0kb upstream 1.0kb upstream 6239 true A06: 3217408-3223646 Brassica rapa FPsc
Brara.F00540 1.0kb upstream 1.0kb upstream 1000 false A06: 3217408-3218407 Brassica rapa FPsc
Brara.F00540 1.0kb downstream 1.0kb downstream 6239 true A06: 3218408-3224646 Brassica rapa FPsc
Brara.F00540 1.0kb downstream 1.0kb downstream 1000 false A06: 3223647-3224646 Brassica rapa FPsc
Brara.F00540 2.0kb upstream 2.0kb upstream 7239 true A06: 3216408-3223646 Brassica rapa FPsc
Brara.F00540 2.0kb upstream 2.0kb upstream 2000 false A06: 3216408-3218407 Brassica rapa FPsc
Brara.F00540 2.0kb downstream 2.0kb downstream 7239 true A06: 3218408-3225646 Brassica rapa FPsc
Brara.F00540 2.0kb downstream 2.0kb downstream 2000 false A06: 3223647-3225646 Brassica rapa FPsc
Brara.F00540 5.0kb upstream 5.0kb upstream 10239 true A06: 3213408-3223646 Brassica rapa FPsc
Brara.F00540 5.0kb upstream 5.0kb upstream 5000 false A06: 3213408-3218407 Brassica rapa FPsc
Brara.F00540 5.0kb downstream 5.0kb downstream 10239 true A06: 3218408-3228646 Brassica rapa FPsc
Brara.F00540 5.0kb downstream 5.0kb downstream 5000 false A06: 3223647-3228646 Brassica rapa FPsc
Brara.F00540 10.0kb upstream 10.0kb upstream 15239 true A06: 3208408-3223646 Brassica rapa FPsc
Brara.F00540 10.0kb upstream 10.0kb upstream 10000 false A06: 3208408-3218407 Brassica rapa FPsc
Brara.F00540 10.0kb downstream 10.0kb downstream 15239 true A06: 3218408-3233646 Brassica rapa FPsc
Brara.F00540 10.0kb downstream 10.0kb downstream 10000 false A06: 3223647-3233646 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350839 5261 Brassicaceae Singleton cluster - no MSA
123789804 5264 Brassicales-Malvales Singleton cluster - no MSA
124350305 5266 SBM View MSA
124241439 5268 Malvidae View MSA
124068572 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier