Gene : Brara.C04541 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31246:SF5 - MICROTUBULE-ASSOCIATED PROTEIN 70-5 Genomic Order:  4541
Name:  ? Brara.C04541 Secondary Identifier:  ? PAC:30616090
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04541 0.5kb upstream 0.5kb upstream 3211 true A03: 23976825-23980035 Brassica rapa FPsc
Brara.C04541 0.5kb upstream 0.5kb upstream 500 false A03: 23979536-23980035 Brassica rapa FPsc
Brara.C04541 0.5kb downstream 0.5kb downstream 3211 true A03: 23976325-23979535 Brassica rapa FPsc
Brara.C04541 0.5kb downstream 0.5kb downstream 500 false A03: 23976325-23976824 Brassica rapa FPsc
Brara.C04541 1.0kb upstream 1.0kb upstream 3711 true A03: 23976825-23980535 Brassica rapa FPsc
Brara.C04541 1.0kb upstream 1.0kb upstream 1000 false A03: 23979536-23980535 Brassica rapa FPsc
Brara.C04541 1.0kb downstream 1.0kb downstream 3711 true A03: 23975825-23979535 Brassica rapa FPsc
Brara.C04541 1.0kb downstream 1.0kb downstream 1000 false A03: 23975825-23976824 Brassica rapa FPsc
Brara.C04541 2.0kb upstream 2.0kb upstream 4711 true A03: 23976825-23981535 Brassica rapa FPsc
Brara.C04541 2.0kb upstream 2.0kb upstream 2000 false A03: 23979536-23981535 Brassica rapa FPsc
Brara.C04541 2.0kb downstream 2.0kb downstream 4711 true A03: 23974825-23979535 Brassica rapa FPsc
Brara.C04541 2.0kb downstream 2.0kb downstream 2000 false A03: 23974825-23976824 Brassica rapa FPsc
Brara.C04541 5.0kb upstream 5.0kb upstream 7711 true A03: 23976825-23984535 Brassica rapa FPsc
Brara.C04541 5.0kb upstream 5.0kb upstream 5000 false A03: 23979536-23984535 Brassica rapa FPsc
Brara.C04541 5.0kb downstream 5.0kb downstream 7711 true A03: 23971825-23979535 Brassica rapa FPsc
Brara.C04541 5.0kb downstream 5.0kb downstream 5000 false A03: 23971825-23976824 Brassica rapa FPsc
Brara.C04541 10.0kb upstream 10.0kb upstream 12711 true A03: 23976825-23989535 Brassica rapa FPsc
Brara.C04541 10.0kb upstream 10.0kb upstream 10000 false A03: 23979536-23989535 Brassica rapa FPsc
Brara.C04541 10.0kb downstream 10.0kb downstream 12711 true A03: 23966825-23979535 Brassica rapa FPsc
Brara.C04541 10.0kb downstream 10.0kb downstream 10000 false A03: 23966825-23976824 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347113 5261 Brassicaceae Singleton cluster - no MSA
123786694 5264 Brassicales-Malvales Singleton cluster - no MSA
124284794 5266 SBM Singleton cluster - no MSA
124251026 5268 Malvidae View MSA
124071128 5270 Rosid View MSA
123749166 5271 Pentapetalae View MSA
122793907 5272 Eudicot View MSA
122048674 5273 Angiosperm View MSA
123428932 5275 Viridiplantae View MSA
121351939 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier