Gene : Brara.F00496 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR18952:SF100 - ALPHA CARBONIC ANHYDRASE 5 Genomic Order:  496
Name:  ? Brara.F00496 Secondary Identifier:  ? PAC:30629073
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CYANCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-241 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7117 Brassica rapa FPsc pathologic  
BrapaFPsc PWYQT-4429 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00496 0.5kb upstream 0.5kb upstream 2503 true A06: 3009902-3012404 Brassica rapa FPsc
Brara.F00496 0.5kb upstream 0.5kb upstream 500 false A06: 3011905-3012404 Brassica rapa FPsc
Brara.F00496 0.5kb downstream 0.5kb downstream 2503 true A06: 3009402-3011904 Brassica rapa FPsc
Brara.F00496 0.5kb downstream 0.5kb downstream 500 false A06: 3009402-3009901 Brassica rapa FPsc
Brara.F00496 1.0kb upstream 1.0kb upstream 3003 true A06: 3009902-3012904 Brassica rapa FPsc
Brara.F00496 1.0kb upstream 1.0kb upstream 1000 false A06: 3011905-3012904 Brassica rapa FPsc
Brara.F00496 1.0kb downstream 1.0kb downstream 3003 true A06: 3008902-3011904 Brassica rapa FPsc
Brara.F00496 1.0kb downstream 1.0kb downstream 1000 false A06: 3008902-3009901 Brassica rapa FPsc
Brara.F00496 2.0kb upstream 2.0kb upstream 4003 true A06: 3009902-3013904 Brassica rapa FPsc
Brara.F00496 2.0kb upstream 2.0kb upstream 2000 false A06: 3011905-3013904 Brassica rapa FPsc
Brara.F00496 2.0kb downstream 2.0kb downstream 4003 true A06: 3007902-3011904 Brassica rapa FPsc
Brara.F00496 2.0kb downstream 2.0kb downstream 2000 false A06: 3007902-3009901 Brassica rapa FPsc
Brara.F00496 5.0kb upstream 5.0kb upstream 7003 true A06: 3009902-3016904 Brassica rapa FPsc
Brara.F00496 5.0kb upstream 5.0kb upstream 5000 false A06: 3011905-3016904 Brassica rapa FPsc
Brara.F00496 5.0kb downstream 5.0kb downstream 7003 true A06: 3004902-3011904 Brassica rapa FPsc
Brara.F00496 5.0kb downstream 5.0kb downstream 5000 false A06: 3004902-3009901 Brassica rapa FPsc
Brara.F00496 10.0kb upstream 10.0kb upstream 12003 true A06: 3009902-3021904 Brassica rapa FPsc
Brara.F00496 10.0kb upstream 10.0kb upstream 10000 false A06: 3011905-3021904 Brassica rapa FPsc
Brara.F00496 10.0kb downstream 10.0kb downstream 12003 true A06: 2999902-3011904 Brassica rapa FPsc
Brara.F00496 10.0kb downstream 10.0kb downstream 10000 false A06: 2999902-3009901 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510399 5273 Angiosperm View MSA
122363369 5261 Brassicaceae View MSA
123798526 5264 Brassicales-Malvales View MSA
124296152 5266 SBM View MSA
124148386 5268 Malvidae View MSA
123874385 5270 Rosid View MSA
123458369 5271 Pentapetalae View MSA
122493775 5272 Eudicot View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier