Gene : Brara.C04421 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  4421
Name:  ? Brara.C04421 Secondary Identifier:  ? PAC:30615101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C04421 0.5kb upstream 0.5kb upstream 4175 true A03: 23271224-23275398 Brassica rapa FPsc
Brara.C04421 0.5kb upstream 0.5kb upstream 500 false A03: 23274899-23275398 Brassica rapa FPsc
Brara.C04421 0.5kb downstream 0.5kb downstream 4175 true A03: 23270724-23274898 Brassica rapa FPsc
Brara.C04421 0.5kb downstream 0.5kb downstream 500 false A03: 23270724-23271223 Brassica rapa FPsc
Brara.C04421 1.0kb upstream 1.0kb upstream 4675 true A03: 23271224-23275898 Brassica rapa FPsc
Brara.C04421 1.0kb upstream 1.0kb upstream 1000 false A03: 23274899-23275898 Brassica rapa FPsc
Brara.C04421 1.0kb downstream 1.0kb downstream 4675 true A03: 23270224-23274898 Brassica rapa FPsc
Brara.C04421 1.0kb downstream 1.0kb downstream 1000 false A03: 23270224-23271223 Brassica rapa FPsc
Brara.C04421 2.0kb upstream 2.0kb upstream 5675 true A03: 23271224-23276898 Brassica rapa FPsc
Brara.C04421 2.0kb upstream 2.0kb upstream 2000 false A03: 23274899-23276898 Brassica rapa FPsc
Brara.C04421 2.0kb downstream 2.0kb downstream 5675 true A03: 23269224-23274898 Brassica rapa FPsc
Brara.C04421 2.0kb downstream 2.0kb downstream 2000 false A03: 23269224-23271223 Brassica rapa FPsc
Brara.C04421 5.0kb upstream 5.0kb upstream 8675 true A03: 23271224-23279898 Brassica rapa FPsc
Brara.C04421 5.0kb upstream 5.0kb upstream 5000 false A03: 23274899-23279898 Brassica rapa FPsc
Brara.C04421 5.0kb downstream 5.0kb downstream 8675 true A03: 23266224-23274898 Brassica rapa FPsc
Brara.C04421 5.0kb downstream 5.0kb downstream 5000 false A03: 23266224-23271223 Brassica rapa FPsc
Brara.C04421 10.0kb upstream 10.0kb upstream 13675 true A03: 23271224-23284898 Brassica rapa FPsc
Brara.C04421 10.0kb upstream 10.0kb upstream 10000 false A03: 23274899-23284898 Brassica rapa FPsc
Brara.C04421 10.0kb downstream 10.0kb downstream 13675 true A03: 23261224-23274898 Brassica rapa FPsc
Brara.C04421 10.0kb downstream 10.0kb downstream 10000 false A03: 23261224-23271223 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346851 5261 Brassicaceae Singleton cluster - no MSA
123786480 5264 Brassicales-Malvales Singleton cluster - no MSA
124284586 5266 SBM Singleton cluster - no MSA
124138774 5268 Malvidae Singleton cluster - no MSA
123866274 5270 Rosid Singleton cluster - no MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier