Gene : Brara.D00265 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR24067//PTHR24067:SF112 - UBIQUITIN-CONJUGATING ENZYME E2 Genomic Order:  265
Name:  ? Brara.D00265 Secondary Identifier:  ? PAC:30622963
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00265 0.5kb upstream 0.5kb upstream 2101 true A04: 1809438-1811538 Brassica rapa FPsc
Brara.D00265 0.5kb upstream 0.5kb upstream 500 false A04: 1809438-1809937 Brassica rapa FPsc
Brara.D00265 0.5kb downstream 0.5kb downstream 2101 true A04: 1809938-1812038 Brassica rapa FPsc
Brara.D00265 0.5kb downstream 0.5kb downstream 500 false A04: 1811539-1812038 Brassica rapa FPsc
Brara.D00265 1.0kb upstream 1.0kb upstream 2601 true A04: 1808938-1811538 Brassica rapa FPsc
Brara.D00265 1.0kb upstream 1.0kb upstream 1000 false A04: 1808938-1809937 Brassica rapa FPsc
Brara.D00265 1.0kb downstream 1.0kb downstream 2601 true A04: 1809938-1812538 Brassica rapa FPsc
Brara.D00265 1.0kb downstream 1.0kb downstream 1000 false A04: 1811539-1812538 Brassica rapa FPsc
Brara.D00265 2.0kb upstream 2.0kb upstream 3601 true A04: 1807938-1811538 Brassica rapa FPsc
Brara.D00265 2.0kb upstream 2.0kb upstream 2000 false A04: 1807938-1809937 Brassica rapa FPsc
Brara.D00265 2.0kb downstream 2.0kb downstream 3601 true A04: 1809938-1813538 Brassica rapa FPsc
Brara.D00265 2.0kb downstream 2.0kb downstream 2000 false A04: 1811539-1813538 Brassica rapa FPsc
Brara.D00265 5.0kb upstream 5.0kb upstream 6601 true A04: 1804938-1811538 Brassica rapa FPsc
Brara.D00265 5.0kb upstream 5.0kb upstream 5000 false A04: 1804938-1809937 Brassica rapa FPsc
Brara.D00265 5.0kb downstream 5.0kb downstream 6601 true A04: 1809938-1816538 Brassica rapa FPsc
Brara.D00265 5.0kb downstream 5.0kb downstream 5000 false A04: 1811539-1816538 Brassica rapa FPsc
Brara.D00265 10.0kb upstream 10.0kb upstream 11601 true A04: 1799938-1811538 Brassica rapa FPsc
Brara.D00265 10.0kb upstream 10.0kb upstream 10000 false A04: 1799938-1809937 Brassica rapa FPsc
Brara.D00265 10.0kb downstream 10.0kb downstream 11601 true A04: 1809938-1821538 Brassica rapa FPsc
Brara.D00265 10.0kb downstream 10.0kb downstream 10000 false A04: 1811539-1821538 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375381 5261 Brassicaceae View MSA
123839488 5264 Brassicales-Malvales View MSA
124344755 5266 SBM View MSA
124236998 5268 Malvidae View MSA
124074734 5270 Rosid View MSA
123752891 5271 Pentapetalae View MSA
122794655 5272 Eudicot View MSA
122047112 5273 Angiosperm View MSA
121344973 5274 Embryophyte View MSA
123425853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier