Gene : Brara.D00279 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23342 - N-ACETYLGLUTAMATE SYNTHASE Genomic Order:  279
Name:  ? Brara.D00279 Secondary Identifier:  ? PAC:30621700
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARGSYNBSUB-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ARGSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLUTORN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00279 0.5kb upstream 0.5kb upstream 1535 true A04: 1931495-1933029 Brassica rapa FPsc
Brara.D00279 0.5kb upstream 0.5kb upstream 500 false A04: 1931495-1931994 Brassica rapa FPsc
Brara.D00279 0.5kb downstream 0.5kb downstream 1535 true A04: 1931995-1933529 Brassica rapa FPsc
Brara.D00279 0.5kb downstream 0.5kb downstream 500 false A04: 1933030-1933529 Brassica rapa FPsc
Brara.D00279 1.0kb upstream 1.0kb upstream 2035 true A04: 1930995-1933029 Brassica rapa FPsc
Brara.D00279 1.0kb upstream 1.0kb upstream 1000 false A04: 1930995-1931994 Brassica rapa FPsc
Brara.D00279 1.0kb downstream 1.0kb downstream 2035 true A04: 1931995-1934029 Brassica rapa FPsc
Brara.D00279 1.0kb downstream 1.0kb downstream 1000 false A04: 1933030-1934029 Brassica rapa FPsc
Brara.D00279 2.0kb upstream 2.0kb upstream 3035 true A04: 1929995-1933029 Brassica rapa FPsc
Brara.D00279 2.0kb upstream 2.0kb upstream 2000 false A04: 1929995-1931994 Brassica rapa FPsc
Brara.D00279 2.0kb downstream 2.0kb downstream 3035 true A04: 1931995-1935029 Brassica rapa FPsc
Brara.D00279 2.0kb downstream 2.0kb downstream 2000 false A04: 1933030-1935029 Brassica rapa FPsc
Brara.D00279 5.0kb upstream 5.0kb upstream 6035 true A04: 1926995-1933029 Brassica rapa FPsc
Brara.D00279 5.0kb upstream 5.0kb upstream 5000 false A04: 1926995-1931994 Brassica rapa FPsc
Brara.D00279 5.0kb downstream 5.0kb downstream 6035 true A04: 1931995-1938029 Brassica rapa FPsc
Brara.D00279 5.0kb downstream 5.0kb downstream 5000 false A04: 1933030-1938029 Brassica rapa FPsc
Brara.D00279 10.0kb upstream 10.0kb upstream 11035 true A04: 1921995-1933029 Brassica rapa FPsc
Brara.D00279 10.0kb upstream 10.0kb upstream 10000 false A04: 1921995-1931994 Brassica rapa FPsc
Brara.D00279 10.0kb downstream 10.0kb downstream 11035 true A04: 1931995-1943029 Brassica rapa FPsc
Brara.D00279 10.0kb downstream 10.0kb downstream 10000 false A04: 1933030-1943029 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348690 5261 Brassicaceae Singleton cluster - no MSA
123787995 5264 Brassicales-Malvales Singleton cluster - no MSA
124350403 5266 SBM View MSA
124250749 5268 Malvidae View MSA
124062864 5270 Rosid View MSA
123739875 5271 Pentapetalae View MSA
122792416 5272 Eudicot View MSA
122045485 5273 Angiosperm View MSA
121347525 5274 Embryophyte View MSA
123424020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier