Gene : Brara.D00184 B. rapa FPsc v1.3
Defline:  (1 of 25) PTHR10353:SF37 - BETA-D-GLUCOPYRANOSYL ABSCISATE BETA-GLUCOSIDASE-RELATED Genomic Order:  184
Name:  ? Brara.D00184 Secondary Identifier:  ? PAC:30621588
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5176 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7089 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7091 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7092 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00184 0.5kb upstream 0.5kb upstream 2637 true A04: 1245592-1248228 Brassica rapa FPsc
Brara.D00184 0.5kb upstream 0.5kb upstream 500 false A04: 1247729-1248228 Brassica rapa FPsc
Brara.D00184 0.5kb downstream 0.5kb downstream 2637 true A04: 1245092-1247728 Brassica rapa FPsc
Brara.D00184 0.5kb downstream 0.5kb downstream 500 false A04: 1245092-1245591 Brassica rapa FPsc
Brara.D00184 1.0kb upstream 1.0kb upstream 3137 true A04: 1245592-1248728 Brassica rapa FPsc
Brara.D00184 1.0kb upstream 1.0kb upstream 1000 false A04: 1247729-1248728 Brassica rapa FPsc
Brara.D00184 1.0kb downstream 1.0kb downstream 3137 true A04: 1244592-1247728 Brassica rapa FPsc
Brara.D00184 1.0kb downstream 1.0kb downstream 1000 false A04: 1244592-1245591 Brassica rapa FPsc
Brara.D00184 2.0kb upstream 2.0kb upstream 4137 true A04: 1245592-1249728 Brassica rapa FPsc
Brara.D00184 2.0kb upstream 2.0kb upstream 2000 false A04: 1247729-1249728 Brassica rapa FPsc
Brara.D00184 2.0kb downstream 2.0kb downstream 4137 true A04: 1243592-1247728 Brassica rapa FPsc
Brara.D00184 2.0kb downstream 2.0kb downstream 2000 false A04: 1243592-1245591 Brassica rapa FPsc
Brara.D00184 5.0kb upstream 5.0kb upstream 7137 true A04: 1245592-1252728 Brassica rapa FPsc
Brara.D00184 5.0kb upstream 5.0kb upstream 5000 false A04: 1247729-1252728 Brassica rapa FPsc
Brara.D00184 5.0kb downstream 5.0kb downstream 7137 true A04: 1240592-1247728 Brassica rapa FPsc
Brara.D00184 5.0kb downstream 5.0kb downstream 5000 false A04: 1240592-1245591 Brassica rapa FPsc
Brara.D00184 10.0kb upstream 10.0kb upstream 12137 true A04: 1245592-1257728 Brassica rapa FPsc
Brara.D00184 10.0kb upstream 10.0kb upstream 10000 false A04: 1247729-1257728 Brassica rapa FPsc
Brara.D00184 10.0kb downstream 10.0kb downstream 12137 true A04: 1235592-1247728 Brassica rapa FPsc
Brara.D00184 10.0kb downstream 10.0kb downstream 10000 false A04: 1235592-1245591 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348660 5261 Brassicaceae Singleton cluster - no MSA
123787968 5264 Brassicales-Malvales Singleton cluster - no MSA
124286017 5266 SBM Singleton cluster - no MSA
124256188 5268 Malvidae View MSA
124075612 5270 Rosid View MSA
123628925 5271 Pentapetalae View MSA
122663159 5272 Eudicot View MSA
122051599 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier