Gene : Brara.F01107 B. rapa FPsc v1.3
Defline:  (1 of 8) PTHR12663:SF3 - ASPARTYL BETA-HYDROXYLASE N-TERMINAL REGION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1107
Name:  ? Brara.F01107 Secondary Identifier:  ? PAC:30631844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01107 0.5kb upstream 0.5kb upstream 4645 true A06: 6229688-6234332 Brassica rapa FPsc
Brara.F01107 0.5kb upstream 0.5kb upstream 500 false A06: 6229688-6230187 Brassica rapa FPsc
Brara.F01107 0.5kb downstream 0.5kb downstream 4645 true A06: 6230188-6234832 Brassica rapa FPsc
Brara.F01107 0.5kb downstream 0.5kb downstream 500 false A06: 6234333-6234832 Brassica rapa FPsc
Brara.F01107 1.0kb upstream 1.0kb upstream 5145 true A06: 6229188-6234332 Brassica rapa FPsc
Brara.F01107 1.0kb upstream 1.0kb upstream 1000 false A06: 6229188-6230187 Brassica rapa FPsc
Brara.F01107 1.0kb downstream 1.0kb downstream 5145 true A06: 6230188-6235332 Brassica rapa FPsc
Brara.F01107 1.0kb downstream 1.0kb downstream 1000 false A06: 6234333-6235332 Brassica rapa FPsc
Brara.F01107 2.0kb upstream 2.0kb upstream 6145 true A06: 6228188-6234332 Brassica rapa FPsc
Brara.F01107 2.0kb upstream 2.0kb upstream 2000 false A06: 6228188-6230187 Brassica rapa FPsc
Brara.F01107 2.0kb downstream 2.0kb downstream 6145 true A06: 6230188-6236332 Brassica rapa FPsc
Brara.F01107 2.0kb downstream 2.0kb downstream 2000 false A06: 6234333-6236332 Brassica rapa FPsc
Brara.F01107 5.0kb upstream 5.0kb upstream 9145 true A06: 6225188-6234332 Brassica rapa FPsc
Brara.F01107 5.0kb upstream 5.0kb upstream 5000 false A06: 6225188-6230187 Brassica rapa FPsc
Brara.F01107 5.0kb downstream 5.0kb downstream 9145 true A06: 6230188-6239332 Brassica rapa FPsc
Brara.F01107 5.0kb downstream 5.0kb downstream 5000 false A06: 6234333-6239332 Brassica rapa FPsc
Brara.F01107 10.0kb upstream 10.0kb upstream 14145 true A06: 6220188-6234332 Brassica rapa FPsc
Brara.F01107 10.0kb upstream 10.0kb upstream 10000 false A06: 6220188-6230187 Brassica rapa FPsc
Brara.F01107 10.0kb downstream 10.0kb downstream 14145 true A06: 6230188-6244332 Brassica rapa FPsc
Brara.F01107 10.0kb downstream 10.0kb downstream 10000 false A06: 6234333-6244332 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351025 5261 Brassicaceae Singleton cluster - no MSA
123842462 5264 Brassicales-Malvales View MSA
124323515 5266 SBM View MSA
124251613 5268 Malvidae View MSA
124073544 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier