Gene : Brara.F00949 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN Genomic Order:  949
Name:  ? Brara.F00949 Secondary Identifier:  ? PAC:30631776
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00949 0.5kb upstream 0.5kb upstream 1458 true A06: 5444609-5446066 Brassica rapa FPsc
Brara.F00949 0.5kb upstream 0.5kb upstream 500 false A06: 5445567-5446066 Brassica rapa FPsc
Brara.F00949 0.5kb downstream 0.5kb downstream 1458 true A06: 5444109-5445566 Brassica rapa FPsc
Brara.F00949 0.5kb downstream 0.5kb downstream 500 false A06: 5444109-5444608 Brassica rapa FPsc
Brara.F00949 1.0kb upstream 1.0kb upstream 1958 true A06: 5444609-5446566 Brassica rapa FPsc
Brara.F00949 1.0kb upstream 1.0kb upstream 1000 false A06: 5445567-5446566 Brassica rapa FPsc
Brara.F00949 1.0kb downstream 1.0kb downstream 1958 true A06: 5443609-5445566 Brassica rapa FPsc
Brara.F00949 1.0kb downstream 1.0kb downstream 1000 false A06: 5443609-5444608 Brassica rapa FPsc
Brara.F00949 2.0kb upstream 2.0kb upstream 2958 true A06: 5444609-5447566 Brassica rapa FPsc
Brara.F00949 2.0kb upstream 2.0kb upstream 2000 false A06: 5445567-5447566 Brassica rapa FPsc
Brara.F00949 2.0kb downstream 2.0kb downstream 2958 true A06: 5442609-5445566 Brassica rapa FPsc
Brara.F00949 2.0kb downstream 2.0kb downstream 2000 false A06: 5442609-5444608 Brassica rapa FPsc
Brara.F00949 5.0kb upstream 5.0kb upstream 5958 true A06: 5444609-5450566 Brassica rapa FPsc
Brara.F00949 5.0kb upstream 5.0kb upstream 5000 false A06: 5445567-5450566 Brassica rapa FPsc
Brara.F00949 5.0kb downstream 5.0kb downstream 5958 true A06: 5439609-5445566 Brassica rapa FPsc
Brara.F00949 5.0kb downstream 5.0kb downstream 5000 false A06: 5439609-5444608 Brassica rapa FPsc
Brara.F00949 10.0kb upstream 10.0kb upstream 10958 true A06: 5444609-5455566 Brassica rapa FPsc
Brara.F00949 10.0kb upstream 10.0kb upstream 10000 false A06: 5445567-5455566 Brassica rapa FPsc
Brara.F00949 10.0kb downstream 10.0kb downstream 10958 true A06: 5434609-5445566 Brassica rapa FPsc
Brara.F00949 10.0kb downstream 10.0kb downstream 10000 false A06: 5434609-5444608 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370978 5261 Brassicaceae View MSA
123837934 5264 Brassicales-Malvales View MSA
124337851 5266 SBM View MSA
124240205 5268 Malvidae View MSA
124061034 5270 Rosid View MSA
123749515 5271 Pentapetalae View MSA
122792844 5272 Eudicot View MSA
122052093 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121312953 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier