Gene : Brara.G00467 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR34455:SF1 - EXPRESSED PROTEIN Genomic Order:  467
Name:  ? Brara.G00467 Secondary Identifier:  ? PAC:30634566
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-101 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00467 0.5kb upstream 0.5kb upstream 857 true A07: 5733728-5734584 Brassica rapa FPsc
Brara.G00467 0.5kb upstream 0.5kb upstream 500 false A07: 5734085-5734584 Brassica rapa FPsc
Brara.G00467 0.5kb downstream 0.5kb downstream 857 true A07: 5733228-5734084 Brassica rapa FPsc
Brara.G00467 0.5kb downstream 0.5kb downstream 500 false A07: 5733228-5733727 Brassica rapa FPsc
Brara.G00467 1.0kb upstream 1.0kb upstream 1357 true A07: 5733728-5735084 Brassica rapa FPsc
Brara.G00467 1.0kb upstream 1.0kb upstream 1000 false A07: 5734085-5735084 Brassica rapa FPsc
Brara.G00467 1.0kb downstream 1.0kb downstream 1357 true A07: 5732728-5734084 Brassica rapa FPsc
Brara.G00467 1.0kb downstream 1.0kb downstream 1000 false A07: 5732728-5733727 Brassica rapa FPsc
Brara.G00467 2.0kb upstream 2.0kb upstream 2357 true A07: 5733728-5736084 Brassica rapa FPsc
Brara.G00467 2.0kb upstream 2.0kb upstream 2000 false A07: 5734085-5736084 Brassica rapa FPsc
Brara.G00467 2.0kb downstream 2.0kb downstream 2357 true A07: 5731728-5734084 Brassica rapa FPsc
Brara.G00467 2.0kb downstream 2.0kb downstream 2000 false A07: 5731728-5733727 Brassica rapa FPsc
Brara.G00467 5.0kb upstream 5.0kb upstream 5357 true A07: 5733728-5739084 Brassica rapa FPsc
Brara.G00467 5.0kb upstream 5.0kb upstream 5000 false A07: 5734085-5739084 Brassica rapa FPsc
Brara.G00467 5.0kb downstream 5.0kb downstream 5357 true A07: 5728728-5734084 Brassica rapa FPsc
Brara.G00467 5.0kb downstream 5.0kb downstream 5000 false A07: 5728728-5733727 Brassica rapa FPsc
Brara.G00467 10.0kb upstream 10.0kb upstream 10357 true A07: 5733728-5744084 Brassica rapa FPsc
Brara.G00467 10.0kb upstream 10.0kb upstream 10000 false A07: 5734085-5744084 Brassica rapa FPsc
Brara.G00467 10.0kb downstream 10.0kb downstream 10357 true A07: 5723728-5734084 Brassica rapa FPsc
Brara.G00467 10.0kb downstream 10.0kb downstream 10000 false A07: 5723728-5733727 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370651 5261 Brassicaceae View MSA
123839864 5264 Brassicales-Malvales View MSA
124349923 5266 SBM View MSA
124245307 5268 Malvidae View MSA
124072175 5270 Rosid View MSA
123739685 5271 Pentapetalae View MSA
122793757 5272 Eudicot View MSA
122041544 5273 Angiosperm View MSA
121346235 5274 Embryophyte View MSA
123428099 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier