Gene : Brara.G00808 B. rapa FPsc v1.3
Defline:  (1 of 279) PF00847 - AP2 domain (AP2) Genomic Order:  808
Name:  ? Brara.G00808 Secondary Identifier:  ? PAC:30635181
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00808 0.5kb upstream 0.5kb upstream 1037 true A07: 10007009-10008045 Brassica rapa FPsc
Brara.G00808 0.5kb upstream 0.5kb upstream 500 false A07: 10007546-10008045 Brassica rapa FPsc
Brara.G00808 0.5kb downstream 0.5kb downstream 1037 true A07: 10006509-10007545 Brassica rapa FPsc
Brara.G00808 0.5kb downstream 0.5kb downstream 500 false A07: 10006509-10007008 Brassica rapa FPsc
Brara.G00808 1.0kb upstream 1.0kb upstream 1537 true A07: 10007009-10008545 Brassica rapa FPsc
Brara.G00808 1.0kb upstream 1.0kb upstream 1000 false A07: 10007546-10008545 Brassica rapa FPsc
Brara.G00808 1.0kb downstream 1.0kb downstream 1537 true A07: 10006009-10007545 Brassica rapa FPsc
Brara.G00808 1.0kb downstream 1.0kb downstream 1000 false A07: 10006009-10007008 Brassica rapa FPsc
Brara.G00808 2.0kb upstream 2.0kb upstream 2537 true A07: 10007009-10009545 Brassica rapa FPsc
Brara.G00808 2.0kb upstream 2.0kb upstream 2000 false A07: 10007546-10009545 Brassica rapa FPsc
Brara.G00808 2.0kb downstream 2.0kb downstream 2537 true A07: 10005009-10007545 Brassica rapa FPsc
Brara.G00808 2.0kb downstream 2.0kb downstream 2000 false A07: 10005009-10007008 Brassica rapa FPsc
Brara.G00808 5.0kb upstream 5.0kb upstream 5537 true A07: 10007009-10012545 Brassica rapa FPsc
Brara.G00808 5.0kb upstream 5.0kb upstream 5000 false A07: 10007546-10012545 Brassica rapa FPsc
Brara.G00808 5.0kb downstream 5.0kb downstream 5537 true A07: 10002009-10007545 Brassica rapa FPsc
Brara.G00808 5.0kb downstream 5.0kb downstream 5000 false A07: 10002009-10007008 Brassica rapa FPsc
Brara.G00808 10.0kb upstream 10.0kb upstream 10537 true A07: 10007009-10017545 Brassica rapa FPsc
Brara.G00808 10.0kb upstream 10.0kb upstream 10000 false A07: 10007546-10017545 Brassica rapa FPsc
Brara.G00808 10.0kb downstream 10.0kb downstream 10537 true A07: 9997009-10007545 Brassica rapa FPsc
Brara.G00808 10.0kb downstream 10.0kb downstream 10000 false A07: 9997009-10007008 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351856 5261 Brassicaceae Singleton cluster - no MSA
123790678 5264 Brassicales-Malvales Singleton cluster - no MSA
124350154 5266 SBM View MSA
124251534 5268 Malvidae View MSA
124064356 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier