Gene : Brara.G01971 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR33921:SF2 - CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATED Genomic Order:  1971
Name:  ? Brara.G01971 Secondary Identifier:  ? PAC:30633471
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01971 0.5kb upstream 0.5kb upstream 890 true A07: 17888846-17889735 Brassica rapa FPsc
Brara.G01971 0.5kb upstream 0.5kb upstream 500 false A07: 17888846-17889345 Brassica rapa FPsc
Brara.G01971 0.5kb downstream 0.5kb downstream 890 true A07: 17889346-17890235 Brassica rapa FPsc
Brara.G01971 0.5kb downstream 0.5kb downstream 500 false A07: 17889736-17890235 Brassica rapa FPsc
Brara.G01971 1.0kb upstream 1.0kb upstream 1390 true A07: 17888346-17889735 Brassica rapa FPsc
Brara.G01971 1.0kb upstream 1.0kb upstream 1000 false A07: 17888346-17889345 Brassica rapa FPsc
Brara.G01971 1.0kb downstream 1.0kb downstream 1390 true A07: 17889346-17890735 Brassica rapa FPsc
Brara.G01971 1.0kb downstream 1.0kb downstream 1000 false A07: 17889736-17890735 Brassica rapa FPsc
Brara.G01971 2.0kb upstream 2.0kb upstream 2390 true A07: 17887346-17889735 Brassica rapa FPsc
Brara.G01971 2.0kb upstream 2.0kb upstream 2000 false A07: 17887346-17889345 Brassica rapa FPsc
Brara.G01971 2.0kb downstream 2.0kb downstream 2390 true A07: 17889346-17891735 Brassica rapa FPsc
Brara.G01971 2.0kb downstream 2.0kb downstream 2000 false A07: 17889736-17891735 Brassica rapa FPsc
Brara.G01971 5.0kb upstream 5.0kb upstream 5390 true A07: 17884346-17889735 Brassica rapa FPsc
Brara.G01971 5.0kb upstream 5.0kb upstream 5000 false A07: 17884346-17889345 Brassica rapa FPsc
Brara.G01971 5.0kb downstream 5.0kb downstream 5390 true A07: 17889346-17894735 Brassica rapa FPsc
Brara.G01971 5.0kb downstream 5.0kb downstream 5000 false A07: 17889736-17894735 Brassica rapa FPsc
Brara.G01971 10.0kb upstream 10.0kb upstream 10390 true A07: 17879346-17889735 Brassica rapa FPsc
Brara.G01971 10.0kb upstream 10.0kb upstream 10000 false A07: 17879346-17889345 Brassica rapa FPsc
Brara.G01971 10.0kb downstream 10.0kb downstream 10390 true A07: 17889346-17899735 Brassica rapa FPsc
Brara.G01971 10.0kb downstream 10.0kb downstream 10000 false A07: 17889736-17899735 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351415 5261 Brassicaceae Singleton cluster - no MSA
123841379 5264 Brassicales-Malvales View MSA
124347812 5266 SBM View MSA
124254040 5268 Malvidae View MSA
124070241 5270 Rosid View MSA
123742696 5271 Pentapetalae View MSA
122795504 5272 Eudicot View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier