Gene : Brara.H00857 B. rapa FPsc v1.3
Defline:  (1 of 5) PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  857
Name:  ? Brara.H00857 Secondary Identifier:  ? PAC:30649268
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00857 0.5kb upstream 0.5kb upstream 2854 true A08: 10657136-10659989 Brassica rapa FPsc
Brara.H00857 0.5kb upstream 0.5kb upstream 500 false A08: 10657136-10657635 Brassica rapa FPsc
Brara.H00857 0.5kb downstream 0.5kb downstream 2854 true A08: 10657636-10660489 Brassica rapa FPsc
Brara.H00857 0.5kb downstream 0.5kb downstream 500 false A08: 10659990-10660489 Brassica rapa FPsc
Brara.H00857 1.0kb upstream 1.0kb upstream 3354 true A08: 10656636-10659989 Brassica rapa FPsc
Brara.H00857 1.0kb upstream 1.0kb upstream 1000 false A08: 10656636-10657635 Brassica rapa FPsc
Brara.H00857 1.0kb downstream 1.0kb downstream 3354 true A08: 10657636-10660989 Brassica rapa FPsc
Brara.H00857 1.0kb downstream 1.0kb downstream 1000 false A08: 10659990-10660989 Brassica rapa FPsc
Brara.H00857 2.0kb upstream 2.0kb upstream 4354 true A08: 10655636-10659989 Brassica rapa FPsc
Brara.H00857 2.0kb upstream 2.0kb upstream 2000 false A08: 10655636-10657635 Brassica rapa FPsc
Brara.H00857 2.0kb downstream 2.0kb downstream 4354 true A08: 10657636-10661989 Brassica rapa FPsc
Brara.H00857 2.0kb downstream 2.0kb downstream 2000 false A08: 10659990-10661989 Brassica rapa FPsc
Brara.H00857 5.0kb upstream 5.0kb upstream 7354 true A08: 10652636-10659989 Brassica rapa FPsc
Brara.H00857 5.0kb upstream 5.0kb upstream 5000 false A08: 10652636-10657635 Brassica rapa FPsc
Brara.H00857 5.0kb downstream 5.0kb downstream 7354 true A08: 10657636-10664989 Brassica rapa FPsc
Brara.H00857 5.0kb downstream 5.0kb downstream 5000 false A08: 10659990-10664989 Brassica rapa FPsc
Brara.H00857 10.0kb upstream 10.0kb upstream 12354 true A08: 10647636-10659989 Brassica rapa FPsc
Brara.H00857 10.0kb upstream 10.0kb upstream 10000 false A08: 10647636-10657635 Brassica rapa FPsc
Brara.H00857 10.0kb downstream 10.0kb downstream 12354 true A08: 10657636-10669989 Brassica rapa FPsc
Brara.H00857 10.0kb downstream 10.0kb downstream 10000 false A08: 10659990-10669989 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355465 5261 Brassicaceae Singleton cluster - no MSA
123839281 5264 Brassicales-Malvales View MSA
124340689 5266 SBM View MSA
124240130 5268 Malvidae View MSA
124064149 5270 Rosid View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier