Gene : Brara.I03890 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR22763:SF44 - E3 UBIQUITIN LIGASE Genomic Order:  3890
Name:  ? Brara.I03890 Secondary Identifier:  ? PAC:30644075
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03890 0.5kb upstream 0.5kb upstream 1681 true A09: 35553503-35555183 Brassica rapa FPsc
Brara.I03890 0.5kb upstream 0.5kb upstream 500 false A09: 35553503-35554002 Brassica rapa FPsc
Brara.I03890 0.5kb downstream 0.5kb downstream 1681 true A09: 35554003-35555683 Brassica rapa FPsc
Brara.I03890 0.5kb downstream 0.5kb downstream 500 false A09: 35555184-35555683 Brassica rapa FPsc
Brara.I03890 1.0kb upstream 1.0kb upstream 2181 true A09: 35553003-35555183 Brassica rapa FPsc
Brara.I03890 1.0kb upstream 1.0kb upstream 1000 false A09: 35553003-35554002 Brassica rapa FPsc
Brara.I03890 1.0kb downstream 1.0kb downstream 2181 true A09: 35554003-35556183 Brassica rapa FPsc
Brara.I03890 1.0kb downstream 1.0kb downstream 1000 false A09: 35555184-35556183 Brassica rapa FPsc
Brara.I03890 2.0kb upstream 2.0kb upstream 3181 true A09: 35552003-35555183 Brassica rapa FPsc
Brara.I03890 2.0kb upstream 2.0kb upstream 2000 false A09: 35552003-35554002 Brassica rapa FPsc
Brara.I03890 2.0kb downstream 2.0kb downstream 3181 true A09: 35554003-35557183 Brassica rapa FPsc
Brara.I03890 2.0kb downstream 2.0kb downstream 2000 false A09: 35555184-35557183 Brassica rapa FPsc
Brara.I03890 5.0kb upstream 5.0kb upstream 6181 true A09: 35549003-35555183 Brassica rapa FPsc
Brara.I03890 5.0kb upstream 5.0kb upstream 5000 false A09: 35549003-35554002 Brassica rapa FPsc
Brara.I03890 5.0kb downstream 5.0kb downstream 6181 true A09: 35554003-35560183 Brassica rapa FPsc
Brara.I03890 5.0kb downstream 5.0kb downstream 5000 false A09: 35555184-35560183 Brassica rapa FPsc
Brara.I03890 10.0kb upstream 10.0kb upstream 11181 true A09: 35544003-35555183 Brassica rapa FPsc
Brara.I03890 10.0kb upstream 10.0kb upstream 10000 false A09: 35544003-35554002 Brassica rapa FPsc
Brara.I03890 10.0kb downstream 10.0kb downstream 11181 true A09: 35554003-35565183 Brassica rapa FPsc
Brara.I03890 10.0kb downstream 10.0kb downstream 10000 false A09: 35555184-35565183 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510946 5273 Angiosperm View MSA
122370194 5261 Brassicaceae View MSA
123799914 5264 Brassicales-Malvales View MSA
124297384 5266 SBM View MSA
124149293 5268 Malvidae View MSA
123875128 5270 Rosid View MSA
123459003 5271 Pentapetalae View MSA
122494399 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier