Gene : Brara.I04365 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11088:SF30 - ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTIC Genomic Order:  4365
Name:  ? Brara.I04365 Secondary Identifier:  ? PAC:30641238
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2681 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04365 0.5kb upstream 0.5kb upstream 1499 true A09: 38171198-38172696 Brassica rapa FPsc
Brara.I04365 0.5kb upstream 0.5kb upstream 500 false A09: 38172197-38172696 Brassica rapa FPsc
Brara.I04365 0.5kb downstream 0.5kb downstream 1499 true A09: 38170698-38172196 Brassica rapa FPsc
Brara.I04365 0.5kb downstream 0.5kb downstream 500 false A09: 38170698-38171197 Brassica rapa FPsc
Brara.I04365 1.0kb upstream 1.0kb upstream 1999 true A09: 38171198-38173196 Brassica rapa FPsc
Brara.I04365 1.0kb upstream 1.0kb upstream 1000 false A09: 38172197-38173196 Brassica rapa FPsc
Brara.I04365 1.0kb downstream 1.0kb downstream 1999 true A09: 38170198-38172196 Brassica rapa FPsc
Brara.I04365 1.0kb downstream 1.0kb downstream 1000 false A09: 38170198-38171197 Brassica rapa FPsc
Brara.I04365 2.0kb upstream 2.0kb upstream 2999 true A09: 38171198-38174196 Brassica rapa FPsc
Brara.I04365 2.0kb upstream 2.0kb upstream 2000 false A09: 38172197-38174196 Brassica rapa FPsc
Brara.I04365 2.0kb downstream 2.0kb downstream 2999 true A09: 38169198-38172196 Brassica rapa FPsc
Brara.I04365 2.0kb downstream 2.0kb downstream 2000 false A09: 38169198-38171197 Brassica rapa FPsc
Brara.I04365 5.0kb upstream 5.0kb upstream 5999 true A09: 38171198-38177196 Brassica rapa FPsc
Brara.I04365 5.0kb upstream 5.0kb upstream 5000 false A09: 38172197-38177196 Brassica rapa FPsc
Brara.I04365 5.0kb downstream 5.0kb downstream 5999 true A09: 38166198-38172196 Brassica rapa FPsc
Brara.I04365 5.0kb downstream 5.0kb downstream 5000 false A09: 38166198-38171197 Brassica rapa FPsc
Brara.I04365 10.0kb upstream 10.0kb upstream 10999 true A09: 38171198-38182196 Brassica rapa FPsc
Brara.I04365 10.0kb upstream 10.0kb upstream 10000 false A09: 38172197-38182196 Brassica rapa FPsc
Brara.I04365 10.0kb downstream 10.0kb downstream 10999 true A09: 38161198-38172196 Brassica rapa FPsc
Brara.I04365 10.0kb downstream 10.0kb downstream 10000 false A09: 38161198-38171197 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353379 5261 Brassicaceae Singleton cluster - no MSA
123791975 5264 Brassicales-Malvales Singleton cluster - no MSA
124350163 5266 SBM View MSA
124241505 5268 Malvidae View MSA
124062328 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier