Gene : Brara.I05246 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR22952//PTHR22952:SF113 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  5246
Name:  ? Brara.I05246 Secondary Identifier:  ? PAC:30642569
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05246 0.5kb upstream 0.5kb upstream 1686 true A09: 42987125-42988810 Brassica rapa FPsc
Brara.I05246 0.5kb upstream 0.5kb upstream 500 false A09: 42987125-42987624 Brassica rapa FPsc
Brara.I05246 0.5kb downstream 0.5kb downstream 1686 true A09: 42987625-42989310 Brassica rapa FPsc
Brara.I05246 0.5kb downstream 0.5kb downstream 500 false A09: 42988811-42989310 Brassica rapa FPsc
Brara.I05246 1.0kb upstream 1.0kb upstream 2186 true A09: 42986625-42988810 Brassica rapa FPsc
Brara.I05246 1.0kb upstream 1.0kb upstream 1000 false A09: 42986625-42987624 Brassica rapa FPsc
Brara.I05246 1.0kb downstream 1.0kb downstream 2186 true A09: 42987625-42989810 Brassica rapa FPsc
Brara.I05246 1.0kb downstream 1.0kb downstream 1000 false A09: 42988811-42989810 Brassica rapa FPsc
Brara.I05246 2.0kb upstream 2.0kb upstream 3186 true A09: 42985625-42988810 Brassica rapa FPsc
Brara.I05246 2.0kb upstream 2.0kb upstream 2000 false A09: 42985625-42987624 Brassica rapa FPsc
Brara.I05246 2.0kb downstream 2.0kb downstream 3186 true A09: 42987625-42990810 Brassica rapa FPsc
Brara.I05246 2.0kb downstream 2.0kb downstream 2000 false A09: 42988811-42990810 Brassica rapa FPsc
Brara.I05246 5.0kb upstream 5.0kb upstream 6186 true A09: 42982625-42988810 Brassica rapa FPsc
Brara.I05246 5.0kb upstream 5.0kb upstream 5000 false A09: 42982625-42987624 Brassica rapa FPsc
Brara.I05246 5.0kb downstream 5.0kb downstream 6186 true A09: 42987625-42993810 Brassica rapa FPsc
Brara.I05246 5.0kb downstream 5.0kb downstream 5000 false A09: 42988811-42993810 Brassica rapa FPsc
Brara.I05246 10.0kb upstream 10.0kb upstream 11186 true A09: 42977625-42988810 Brassica rapa FPsc
Brara.I05246 10.0kb upstream 10.0kb upstream 10000 false A09: 42977625-42987624 Brassica rapa FPsc
Brara.I05246 10.0kb downstream 10.0kb downstream 11186 true A09: 42987625-42998810 Brassica rapa FPsc
Brara.I05246 10.0kb downstream 10.0kb downstream 10000 false A09: 42988811-42998810 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353715 5261 Brassicaceae Singleton cluster - no MSA
123792238 5264 Brassicales-Malvales Singleton cluster - no MSA
124290121 5266 SBM Singleton cluster - no MSA
124251698 5268 Malvidae View MSA
124067478 5270 Rosid View MSA
123742632 5271 Pentapetalae View MSA
122797176 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier