Gene : Brara.K01135 B. rapa FPsc v1.3
Defline:  (1 of 8) PTHR10891:SF605 - CALCIUM-BINDING PROTEIN CML25-RELATED Genomic Order:  1
Name:  ? Brara.K01135 Secondary Identifier:  ? PAC:30627621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01135 0.5kb upstream 0.5kb upstream 1055 true Scaffold5066: 896-1950 Brassica rapa FPsc
Brara.K01135 0.5kb upstream 0.5kb upstream 500 false Scaffold5066: 1451-1950 Brassica rapa FPsc
Brara.K01135 0.5kb downstream 0.5kb downstream 1055 true Scaffold5066: 396-1450 Brassica rapa FPsc
Brara.K01135 0.5kb downstream 0.5kb downstream 500 false Scaffold5066: 396-895 Brassica rapa FPsc
Brara.K01135 1.0kb upstream 1.0kb upstream 1555 true Scaffold5066: 896-2450 Brassica rapa FPsc
Brara.K01135 1.0kb upstream 1.0kb upstream 1000 false Scaffold5066: 1451-2450 Brassica rapa FPsc
Brara.K01135 1.0kb downstream 1.0kb downstream 1450 true Scaffold5066: 1-1450 Brassica rapa FPsc
Brara.K01135 1.0kb downstream 1.0kb downstream 895 false Scaffold5066: 1-895 Brassica rapa FPsc
Brara.K01135 2.0kb upstream 2.0kb upstream 2555 true Scaffold5066: 896-3450 Brassica rapa FPsc
Brara.K01135 2.0kb upstream 2.0kb upstream 2000 false Scaffold5066: 1451-3450 Brassica rapa FPsc
Brara.K01135 2.0kb downstream 2.0kb downstream 1450 true Scaffold5066: 1-1450 Brassica rapa FPsc
Brara.K01135 2.0kb downstream 2.0kb downstream 895 false Scaffold5066: 1-895 Brassica rapa FPsc
Brara.K01135 5.0kb upstream 5.0kb upstream 5555 true Scaffold5066: 896-6450 Brassica rapa FPsc
Brara.K01135 5.0kb upstream 5.0kb upstream 5000 false Scaffold5066: 1451-6450 Brassica rapa FPsc
Brara.K01135 5.0kb downstream 5.0kb downstream 1450 true Scaffold5066: 1-1450 Brassica rapa FPsc
Brara.K01135 5.0kb downstream 5.0kb downstream 895 false Scaffold5066: 1-895 Brassica rapa FPsc
Brara.K01135 10.0kb upstream 10.0kb upstream 10555 true Scaffold5066: 896-11450 Brassica rapa FPsc
Brara.K01135 10.0kb upstream 10.0kb upstream 10000 false Scaffold5066: 1451-11450 Brassica rapa FPsc
Brara.K01135 10.0kb downstream 10.0kb downstream 1450 true Scaffold5066: 1-1450 Brassica rapa FPsc
Brara.K01135 10.0kb downstream 10.0kb downstream 895 false Scaffold5066: 1-895 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350095 5261 Brassicaceae Singleton cluster - no MSA
123842833 5264 Brassicales-Malvales View MSA
124323810 5266 SBM View MSA
124253055 5268 Malvidae View MSA
124050277 5270 Rosid View MSA
123736874 5271 Pentapetalae View MSA
122791196 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier