Gene : Brara.K01873 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED Genomic Order:  6
Name:  ? Brara.K01873 Secondary Identifier:  ? PAC:30611141
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01873 0.5kb upstream 0.5kb upstream 1757 true Scaffold8989: 52689-54445 Brassica rapa FPsc
Brara.K01873 0.5kb upstream 0.5kb upstream 500 false Scaffold8989: 52689-53188 Brassica rapa FPsc
Brara.K01873 0.5kb downstream 0.5kb downstream 1757 true Scaffold8989: 53189-54945 Brassica rapa FPsc
Brara.K01873 0.5kb downstream 0.5kb downstream 500 false Scaffold8989: 54446-54945 Brassica rapa FPsc
Brara.K01873 1.0kb upstream 1.0kb upstream 2257 true Scaffold8989: 52189-54445 Brassica rapa FPsc
Brara.K01873 1.0kb upstream 1.0kb upstream 1000 false Scaffold8989: 52189-53188 Brassica rapa FPsc
Brara.K01873 1.0kb downstream 1.0kb downstream 2257 true Scaffold8989: 53189-55445 Brassica rapa FPsc
Brara.K01873 1.0kb downstream 1.0kb downstream 1000 false Scaffold8989: 54446-55445 Brassica rapa FPsc
Brara.K01873 2.0kb upstream 2.0kb upstream 3257 true Scaffold8989: 51189-54445 Brassica rapa FPsc
Brara.K01873 2.0kb upstream 2.0kb upstream 2000 false Scaffold8989: 51189-53188 Brassica rapa FPsc
Brara.K01873 2.0kb downstream 2.0kb downstream 3257 true Scaffold8989: 53189-56445 Brassica rapa FPsc
Brara.K01873 2.0kb downstream 2.0kb downstream 2000 false Scaffold8989: 54446-56445 Brassica rapa FPsc
Brara.K01873 5.0kb upstream 5.0kb upstream 6257 true Scaffold8989: 48189-54445 Brassica rapa FPsc
Brara.K01873 5.0kb upstream 5.0kb upstream 5000 false Scaffold8989: 48189-53188 Brassica rapa FPsc
Brara.K01873 5.0kb downstream 5.0kb downstream 6257 true Scaffold8989: 53189-59445 Brassica rapa FPsc
Brara.K01873 5.0kb downstream 5.0kb downstream 5000 false Scaffold8989: 54446-59445 Brassica rapa FPsc
Brara.K01873 10.0kb upstream 10.0kb upstream 11257 true Scaffold8989: 43189-54445 Brassica rapa FPsc
Brara.K01873 10.0kb upstream 10.0kb upstream 10000 false Scaffold8989: 43189-53188 Brassica rapa FPsc
Brara.K01873 10.0kb downstream 10.0kb downstream 11257 true Scaffold8989: 53189-64445 Brassica rapa FPsc
Brara.K01873 10.0kb downstream 10.0kb downstream 10000 false Scaffold8989: 54446-64445 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345865 5261 Brassicaceae Singleton cluster - no MSA
123839327 5264 Brassicales-Malvales View MSA
124337844 5266 SBM View MSA
124251275 5268 Malvidae View MSA
124068292 5270 Rosid View MSA
123750856 5271 Pentapetalae View MSA
122796096 5272 Eudicot View MSA
122047388 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121346576 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier