Protein Family : RING/U-box superfamily protein 124251275

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  41

41 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29794.t000115 (1 of 1) PTHR14155//PTHR14155:SF95 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED R. communis v0.1 1224   29794: 765067-766290
orange1.1g041871m.g (1 of 2) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED C. sinensis v1.1 1248   scaffold00027: 283423-284670
orange1.1g038034m.g (1 of 2) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED C. sinensis v1.1 1269   scaffold00005: 773468-774736
AT4G28890 (1 of 2) PTHR14155//PTHR14155:SF95 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED A. thaliana TAIR10 1403   Chr4: 14256333-14257735
AT2G20030 (1 of 2) PTHR14155//PTHR14155:SF95 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED A. thaliana TAIR10 1173   Chr2: 8647813-8648985
Thhalv10025235m.g (1 of 2) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED E. salsugineum v1.0 1355   scaffold_1: 4809566-4810920
Thhalv10001998m.g (1 of 2) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED E. salsugineum v1.0 1303   scaffold_12: 10397240-10398542
Ciclev10010254m.g (1 of 2) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED C. clementina v1.0 1248   scaffold_1: 7040306-7041553
Ciclev10010263m.g (1 of 2) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED C. clementina v1.0 1269   scaffold_1: 3107011-3108279
Lus10034953.g (1 of 4) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED L. usitatissimum v1.0 1173   scaffold29: 642509-643681
Lus10012975.g (1 of 4) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED L. usitatissimum v1.0 1242   scaffold434: 401030-402271
Lus10011702.g (1 of 4) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED L. usitatissimum v1.0 1200   scaffold476: 447107-448306
Lus10009511.g (1 of 4) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED L. usitatissimum v1.0 1200   scaffold1007: 293027-294226
Gorai.010G074800 (1 of 3) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED G. raimondii v2.1 1795   Chr10: 10626623-10628417
Thecc1EG037183 (1 of 5) K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) T. cacao v1.1 1979   scaffold_9: 2192835-2194813
Thecc1EG037822 (1 of 5) K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) T. cacao v1.1 1967   scaffold_9: 5484676-5486642
Araha.1353s0008 (1 of 2) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED A. halleri v1.1 1456   Scaffold1353: 37848-39303
Araha.19205s0001 (1 of 2) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED A. halleri v1.1 1204   Scaffold19205: 3-1206
Cagra.1225s0002 (1 of 3) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED C. grandiflora v1.1 1314   Scaffold1225: 3143-4456
Cagra.8477s0014 (1 of 1) KOG2177 - Predicted E3 ubiquitin ligase C. grandiflora v1.1 1191   Scaffold8477: 65083-66273
Brara.A00833 (1 of 5) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED B. rapa FPsc v1.3 1378   A01: 4214606-4215983
Brara.G00071 (1 of 5) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED B. rapa FPsc v1.3 1167   A07: 511169-512335
Brara.H01464 (1 of 5) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED B. rapa FPsc v1.3 1418   A08: 15294642-15296059
Brara.I04713 (1 of 5) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED B. rapa FPsc v1.3 1170   A09: 40247528-40248697
Brara.K01873 (1 of 5) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED B. rapa FPsc v1.3 1257   Scaffold8989: 53189-54445
Bostr.7867s0734 (1 of 2) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED B. stricta v1.2 1439   Scaffold7867: 3577422-3578860
Bostr.7903s0164 (1 of 2) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED B. stricta v1.2 1170   Scaffold7903: 810980-812149
SapurV1A.0540s0080 (1 of 3) PTHR14155//PTHR14155:SF95 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED S. purpurea v1.0 1822   chr18: 8856514-8858335
SapurV1A.0272s0030 (1 of 3) PTHR14155//PTHR14155:SF95 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED S. purpurea v1.0 1337   chr06: 22946450-22947786
SapurV1A.0446s0020 (1 of 3) PTHR14155//PTHR14155:SF95 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED S. purpurea v1.0 1251   chr06: 22981157-22982407

41 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g038034m C. sinensis v1.1 124251275 RING/U-box superfamily protein 2 5268 Malvidae
orange1.1g041871m C. sinensis v1.1 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Thhalv10025235m E. salsugineum v1.0 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Lus10009511 L. usitatissimum v1.0 124251275 RING/U-box superfamily protein 4 5268 Malvidae
Lus10011702 L. usitatissimum v1.0 124251275 RING/U-box superfamily protein 4 5268 Malvidae
Lus10012975 L. usitatissimum v1.0 124251275 RING/U-box superfamily protein 4 5268 Malvidae
Brara.K01873.1.p B. rapa FPsc v1.3 124251275 RING/U-box superfamily protein 5 5268 Malvidae
Brara.A00833.1.p B. rapa FPsc v1.3 124251275 RING/U-box superfamily protein 5 5268 Malvidae
Manes.16G072900.1.p M. esculenta v6.1 124251275 RING/U-box superfamily protein 3 5268 Malvidae
AL7G23600.t1 A. lyrata v2.1 124251275 RING/U-box superfamily protein 2 5268 Malvidae
AL3G48060.t1 A. lyrata v2.1 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Potri.006G239500.1.p P. trichocarpa v3.1 124251275 RING/U-box superfamily protein 1 5268 Malvidae
Podel.18G083700.1.p P. deltoides WV94 v2.1 124251275 RING/U-box superfamily protein 3 5268 Malvidae
Carub.0007s1176.1.p C. rubella v1.1 124251275 RING/U-box superfamily protein 2 5268 Malvidae
29794.m003416 R. communis v0.1 124251275 RING/U-box superfamily protein 1 5268 Malvidae
AT4G28890.1 A. thaliana TAIR10 124251275 RING/U-box superfamily protein 2 5268 Malvidae
AT2G20030.1 A. thaliana TAIR10 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Thhalv10001998m E. salsugineum v1.0 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Ciclev10010263m C. clementina v1.0 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Ciclev10010254m C. clementina v1.0 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Lus10034953 L. usitatissimum v1.0 124251275 RING/U-box superfamily protein 4 5268 Malvidae
Gorai.010G074800.1 G. raimondii v2.1 124251275 RING/U-box superfamily protein 1 5268 Malvidae
Thecc1EG037183t1 T. cacao v1.1 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Thecc1EG037822t1 T. cacao v1.1 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Araha.1353s0008.1.p A. halleri v1.1 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Araha.19205s0001.1.p A. halleri v1.1 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Cagra.8477s0014.1.p C. grandiflora v1.1 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Cagra.1225s0002.1.p C. grandiflora v1.1 124251275 RING/U-box superfamily protein 2 5268 Malvidae
Brara.G00071.1.p B. rapa FPsc v1.3 124251275 RING/U-box superfamily protein 5 5268 Malvidae
Brara.I04713.1.p B. rapa FPsc v1.3 124251275 RING/U-box superfamily protein 5 5268 Malvidae