Gene : Thecc1EG037183 T. cacao v1.1
Defline:  (1 of 5) K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Genomic Order:  412
Name:  ? Thecc1EG037183 Secondary Identifier:  ? PAC:27430499
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037183 0.5kb upstream 0.5kb upstream 2479 true scaffold_9: 2192835-2195313 Theobroma cacao
Thecc1EG037183 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2194814-2195313 Theobroma cacao
Thecc1EG037183 0.5kb downstream 0.5kb downstream 2479 true scaffold_9: 2192335-2194813 Theobroma cacao
Thecc1EG037183 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2192335-2192834 Theobroma cacao
Thecc1EG037183 1.0kb upstream 1.0kb upstream 2979 true scaffold_9: 2192835-2195813 Theobroma cacao
Thecc1EG037183 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2194814-2195813 Theobroma cacao
Thecc1EG037183 1.0kb downstream 1.0kb downstream 2979 true scaffold_9: 2191835-2194813 Theobroma cacao
Thecc1EG037183 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2191835-2192834 Theobroma cacao
Thecc1EG037183 2.0kb upstream 2.0kb upstream 3979 true scaffold_9: 2192835-2196813 Theobroma cacao
Thecc1EG037183 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2194814-2196813 Theobroma cacao
Thecc1EG037183 2.0kb downstream 2.0kb downstream 3979 true scaffold_9: 2190835-2194813 Theobroma cacao
Thecc1EG037183 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2190835-2192834 Theobroma cacao
Thecc1EG037183 5.0kb upstream 5.0kb upstream 6979 true scaffold_9: 2192835-2199813 Theobroma cacao
Thecc1EG037183 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2194814-2199813 Theobroma cacao
Thecc1EG037183 5.0kb downstream 5.0kb downstream 6979 true scaffold_9: 2187835-2194813 Theobroma cacao
Thecc1EG037183 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2187835-2192834 Theobroma cacao
Thecc1EG037183 10.0kb upstream 10.0kb upstream 11979 true scaffold_9: 2192835-2204813 Theobroma cacao
Thecc1EG037183 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2194814-2204813 Theobroma cacao
Thecc1EG037183 10.0kb downstream 10.0kb downstream 11979 true scaffold_9: 2182835-2194813 Theobroma cacao
Thecc1EG037183 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2182835-2192834 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123822653 5264 Brassicales-Malvales Singleton cluster - no MSA
124318782 5266 SBM Singleton cluster - no MSA
124251275 5268 Malvidae View MSA
124068292 5270 Rosid View MSA
123750856 5271 Pentapetalae View MSA
122796096 5272 Eudicot View MSA
122047388 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121346576 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain