Gene : Brara.K00394 B. rapa FPsc v1.3
Defline:  (1 of 39) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  22
Name:  ? Brara.K00394 Secondary Identifier:  ? PAC:30614910
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00394 0.5kb upstream 0.5kb upstream 3797 true Scaffold16715: 139622-143418 Brassica rapa FPsc
Brara.K00394 0.5kb upstream 0.5kb upstream 500 false Scaffold16715: 142919-143418 Brassica rapa FPsc
Brara.K00394 0.5kb downstream 0.5kb downstream 3797 true Scaffold16715: 139122-142918 Brassica rapa FPsc
Brara.K00394 0.5kb downstream 0.5kb downstream 500 false Scaffold16715: 139122-139621 Brassica rapa FPsc
Brara.K00394 1.0kb upstream 1.0kb upstream 4297 true Scaffold16715: 139622-143918 Brassica rapa FPsc
Brara.K00394 1.0kb upstream 1.0kb upstream 1000 false Scaffold16715: 142919-143918 Brassica rapa FPsc
Brara.K00394 1.0kb downstream 1.0kb downstream 4297 true Scaffold16715: 138622-142918 Brassica rapa FPsc
Brara.K00394 1.0kb downstream 1.0kb downstream 1000 false Scaffold16715: 138622-139621 Brassica rapa FPsc
Brara.K00394 2.0kb upstream 2.0kb upstream 5297 true Scaffold16715: 139622-144918 Brassica rapa FPsc
Brara.K00394 2.0kb upstream 2.0kb upstream 2000 false Scaffold16715: 142919-144918 Brassica rapa FPsc
Brara.K00394 2.0kb downstream 2.0kb downstream 5297 true Scaffold16715: 137622-142918 Brassica rapa FPsc
Brara.K00394 2.0kb downstream 2.0kb downstream 2000 false Scaffold16715: 137622-139621 Brassica rapa FPsc
Brara.K00394 5.0kb upstream 5.0kb upstream 8297 true Scaffold16715: 139622-147918 Brassica rapa FPsc
Brara.K00394 5.0kb upstream 5.0kb upstream 5000 false Scaffold16715: 142919-147918 Brassica rapa FPsc
Brara.K00394 5.0kb downstream 5.0kb downstream 8297 true Scaffold16715: 134622-142918 Brassica rapa FPsc
Brara.K00394 5.0kb downstream 5.0kb downstream 5000 false Scaffold16715: 134622-139621 Brassica rapa FPsc
Brara.K00394 10.0kb upstream 10.0kb upstream 13297 true Scaffold16715: 139622-152918 Brassica rapa FPsc
Brara.K00394 10.0kb upstream 10.0kb upstream 10000 false Scaffold16715: 142919-152918 Brassica rapa FPsc
Brara.K00394 10.0kb downstream 10.0kb downstream 13297 true Scaffold16715: 129622-142918 Brassica rapa FPsc
Brara.K00394 10.0kb downstream 10.0kb downstream 10000 false Scaffold16715: 129622-139621 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374594 5261 Brassicaceae View MSA
123833894 5264 Brassicales-Malvales View MSA
124337081 5266 SBM View MSA
124237544 5268 Malvidae View MSA
124068789 5270 Rosid View MSA
123737281 5271 Pentapetalae View MSA
122788345 5272 Eudicot View MSA
122045330 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier