Gene : Brara.K00727 B. rapa FPsc v1.3
Defline:  (1 of 2) PF11623 - Protein of unknown function (DUF3252) (DUF3252) Genomic Order:  25
Name:  ? Brara.K00727 Secondary Identifier:  ? PAC:30614549
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00727 0.5kb upstream 0.5kb upstream 1235 true Scaffold25053: 210008-211242 Brassica rapa FPsc
Brara.K00727 0.5kb upstream 0.5kb upstream 500 false Scaffold25053: 210743-211242 Brassica rapa FPsc
Brara.K00727 0.5kb downstream 0.5kb downstream 1235 true Scaffold25053: 209508-210742 Brassica rapa FPsc
Brara.K00727 0.5kb downstream 0.5kb downstream 500 false Scaffold25053: 209508-210007 Brassica rapa FPsc
Brara.K00727 1.0kb upstream 1.0kb upstream 1735 true Scaffold25053: 210008-211742 Brassica rapa FPsc
Brara.K00727 1.0kb upstream 1.0kb upstream 1000 false Scaffold25053: 210743-211742 Brassica rapa FPsc
Brara.K00727 1.0kb downstream 1.0kb downstream 1735 true Scaffold25053: 209008-210742 Brassica rapa FPsc
Brara.K00727 1.0kb downstream 1.0kb downstream 1000 false Scaffold25053: 209008-210007 Brassica rapa FPsc
Brara.K00727 2.0kb upstream 2.0kb upstream 2735 true Scaffold25053: 210008-212742 Brassica rapa FPsc
Brara.K00727 2.0kb upstream 2.0kb upstream 2000 false Scaffold25053: 210743-212742 Brassica rapa FPsc
Brara.K00727 2.0kb downstream 2.0kb downstream 2735 true Scaffold25053: 208008-210742 Brassica rapa FPsc
Brara.K00727 2.0kb downstream 2.0kb downstream 2000 false Scaffold25053: 208008-210007 Brassica rapa FPsc
Brara.K00727 5.0kb upstream 5.0kb upstream 5735 true Scaffold25053: 210008-215742 Brassica rapa FPsc
Brara.K00727 5.0kb upstream 5.0kb upstream 5000 false Scaffold25053: 210743-215742 Brassica rapa FPsc
Brara.K00727 5.0kb downstream 5.0kb downstream 5735 true Scaffold25053: 205008-210742 Brassica rapa FPsc
Brara.K00727 5.0kb downstream 5.0kb downstream 5000 false Scaffold25053: 205008-210007 Brassica rapa FPsc
Brara.K00727 10.0kb upstream 10.0kb upstream 10735 true Scaffold25053: 210008-220742 Brassica rapa FPsc
Brara.K00727 10.0kb upstream 10.0kb upstream 10000 false Scaffold25053: 210743-220742 Brassica rapa FPsc
Brara.K00727 10.0kb downstream 10.0kb downstream 10735 true Scaffold25053: 200008-210742 Brassica rapa FPsc
Brara.K00727 10.0kb downstream 10.0kb downstream 10000 false Scaffold25053: 200008-210007 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374892 5261 Brassicaceae View MSA
123834061 5264 Brassicales-Malvales View MSA
124342523 5266 SBM View MSA
124242729 5268 Malvidae View MSA
124061779 5270 Rosid View MSA
123738491 5271 Pentapetalae View MSA
122787416 5272 Eudicot View MSA
122043955 5273 Angiosperm View MSA
121347639 5274 Embryophyte View MSA
123380587 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier