Gene : Brara.A00396 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  396
Name:  ? Brara.A00396 Secondary Identifier:  ? PAC:30637849
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2724 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6054 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-21 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-389 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00396 0.5kb upstream 0.5kb upstream 3656 true A01: 1966687-1970342 Brassica rapa FPsc
Brara.A00396 0.5kb upstream 0.5kb upstream 500 false A01: 1969843-1970342 Brassica rapa FPsc
Brara.A00396 0.5kb downstream 0.5kb downstream 3656 true A01: 1966187-1969842 Brassica rapa FPsc
Brara.A00396 0.5kb downstream 0.5kb downstream 500 false A01: 1966187-1966686 Brassica rapa FPsc
Brara.A00396 1.0kb upstream 1.0kb upstream 4156 true A01: 1966687-1970842 Brassica rapa FPsc
Brara.A00396 1.0kb upstream 1.0kb upstream 1000 false A01: 1969843-1970842 Brassica rapa FPsc
Brara.A00396 1.0kb downstream 1.0kb downstream 4156 true A01: 1965687-1969842 Brassica rapa FPsc
Brara.A00396 1.0kb downstream 1.0kb downstream 1000 false A01: 1965687-1966686 Brassica rapa FPsc
Brara.A00396 2.0kb upstream 2.0kb upstream 5156 true A01: 1966687-1971842 Brassica rapa FPsc
Brara.A00396 2.0kb upstream 2.0kb upstream 2000 false A01: 1969843-1971842 Brassica rapa FPsc
Brara.A00396 2.0kb downstream 2.0kb downstream 5156 true A01: 1964687-1969842 Brassica rapa FPsc
Brara.A00396 2.0kb downstream 2.0kb downstream 2000 false A01: 1964687-1966686 Brassica rapa FPsc
Brara.A00396 5.0kb upstream 5.0kb upstream 8156 true A01: 1966687-1974842 Brassica rapa FPsc
Brara.A00396 5.0kb upstream 5.0kb upstream 5000 false A01: 1969843-1974842 Brassica rapa FPsc
Brara.A00396 5.0kb downstream 5.0kb downstream 8156 true A01: 1961687-1969842 Brassica rapa FPsc
Brara.A00396 5.0kb downstream 5.0kb downstream 5000 false A01: 1961687-1966686 Brassica rapa FPsc
Brara.A00396 10.0kb upstream 10.0kb upstream 13156 true A01: 1966687-1979842 Brassica rapa FPsc
Brara.A00396 10.0kb upstream 10.0kb upstream 10000 false A01: 1969843-1979842 Brassica rapa FPsc
Brara.A00396 10.0kb downstream 10.0kb downstream 13156 true A01: 1956687-1969842 Brassica rapa FPsc
Brara.A00396 10.0kb downstream 10.0kb downstream 10000 false A01: 1956687-1966686 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364929 5261 Brassicaceae View MSA
123831244 5264 Brassicales-Malvales View MSA
124337798 5266 SBM View MSA
124245156 5268 Malvidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier