Gene : Brara.A00349 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase Genomic Order:  349
Name:  ? Brara.A00349 Secondary Identifier:  ? PAC:30637987
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-841 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00349 0.5kb upstream 0.5kb upstream 2375 true A01: 1790831-1793205 Brassica rapa FPsc
Brara.A00349 0.5kb upstream 0.5kb upstream 500 false A01: 1790831-1791330 Brassica rapa FPsc
Brara.A00349 0.5kb downstream 0.5kb downstream 2375 true A01: 1791331-1793705 Brassica rapa FPsc
Brara.A00349 0.5kb downstream 0.5kb downstream 500 false A01: 1793206-1793705 Brassica rapa FPsc
Brara.A00349 1.0kb upstream 1.0kb upstream 2875 true A01: 1790331-1793205 Brassica rapa FPsc
Brara.A00349 1.0kb upstream 1.0kb upstream 1000 false A01: 1790331-1791330 Brassica rapa FPsc
Brara.A00349 1.0kb downstream 1.0kb downstream 2875 true A01: 1791331-1794205 Brassica rapa FPsc
Brara.A00349 1.0kb downstream 1.0kb downstream 1000 false A01: 1793206-1794205 Brassica rapa FPsc
Brara.A00349 2.0kb upstream 2.0kb upstream 3875 true A01: 1789331-1793205 Brassica rapa FPsc
Brara.A00349 2.0kb upstream 2.0kb upstream 2000 false A01: 1789331-1791330 Brassica rapa FPsc
Brara.A00349 2.0kb downstream 2.0kb downstream 3875 true A01: 1791331-1795205 Brassica rapa FPsc
Brara.A00349 2.0kb downstream 2.0kb downstream 2000 false A01: 1793206-1795205 Brassica rapa FPsc
Brara.A00349 5.0kb upstream 5.0kb upstream 6875 true A01: 1786331-1793205 Brassica rapa FPsc
Brara.A00349 5.0kb upstream 5.0kb upstream 5000 false A01: 1786331-1791330 Brassica rapa FPsc
Brara.A00349 5.0kb downstream 5.0kb downstream 6875 true A01: 1791331-1798205 Brassica rapa FPsc
Brara.A00349 5.0kb downstream 5.0kb downstream 5000 false A01: 1793206-1798205 Brassica rapa FPsc
Brara.A00349 10.0kb upstream 10.0kb upstream 11875 true A01: 1781331-1793205 Brassica rapa FPsc
Brara.A00349 10.0kb upstream 10.0kb upstream 10000 false A01: 1781331-1791330 Brassica rapa FPsc
Brara.A00349 10.0kb downstream 10.0kb downstream 11875 true A01: 1791331-1803205 Brassica rapa FPsc
Brara.A00349 10.0kb downstream 10.0kb downstream 10000 false A01: 1793206-1803205 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366974 5261 Brassicaceae View MSA
123837649 5264 Brassicales-Malvales View MSA
124343225 5266 SBM View MSA
124253609 5268 Malvidae View MSA
124066894 5270 Rosid View MSA
123745700 5271 Pentapetalae View MSA
122790878 5272 Eudicot View MSA
122046645 5273 Angiosperm View MSA
121350725 5274 Embryophyte View MSA
123425714 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier