Gene : Brara.A00548 B. rapa FPsc v1.3
Defline:  (1 of 5) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  548
Name:  ? Brara.A00548 Secondary Identifier:  ? PAC:30639413
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00548 0.5kb upstream 0.5kb upstream 2715 true A01: 2707982-2710696 Brassica rapa FPsc
Brara.A00548 0.5kb upstream 0.5kb upstream 500 false A01: 2710197-2710696 Brassica rapa FPsc
Brara.A00548 0.5kb downstream 0.5kb downstream 2715 true A01: 2707482-2710196 Brassica rapa FPsc
Brara.A00548 0.5kb downstream 0.5kb downstream 500 false A01: 2707482-2707981 Brassica rapa FPsc
Brara.A00548 1.0kb upstream 1.0kb upstream 3215 true A01: 2707982-2711196 Brassica rapa FPsc
Brara.A00548 1.0kb upstream 1.0kb upstream 1000 false A01: 2710197-2711196 Brassica rapa FPsc
Brara.A00548 1.0kb downstream 1.0kb downstream 3215 true A01: 2706982-2710196 Brassica rapa FPsc
Brara.A00548 1.0kb downstream 1.0kb downstream 1000 false A01: 2706982-2707981 Brassica rapa FPsc
Brara.A00548 2.0kb upstream 2.0kb upstream 4215 true A01: 2707982-2712196 Brassica rapa FPsc
Brara.A00548 2.0kb upstream 2.0kb upstream 2000 false A01: 2710197-2712196 Brassica rapa FPsc
Brara.A00548 2.0kb downstream 2.0kb downstream 4215 true A01: 2705982-2710196 Brassica rapa FPsc
Brara.A00548 2.0kb downstream 2.0kb downstream 2000 false A01: 2705982-2707981 Brassica rapa FPsc
Brara.A00548 5.0kb upstream 5.0kb upstream 7215 true A01: 2707982-2715196 Brassica rapa FPsc
Brara.A00548 5.0kb upstream 5.0kb upstream 5000 false A01: 2710197-2715196 Brassica rapa FPsc
Brara.A00548 5.0kb downstream 5.0kb downstream 7215 true A01: 2702982-2710196 Brassica rapa FPsc
Brara.A00548 5.0kb downstream 5.0kb downstream 5000 false A01: 2702982-2707981 Brassica rapa FPsc
Brara.A00548 10.0kb upstream 10.0kb upstream 12215 true A01: 2707982-2720196 Brassica rapa FPsc
Brara.A00548 10.0kb upstream 10.0kb upstream 10000 false A01: 2710197-2720196 Brassica rapa FPsc
Brara.A00548 10.0kb downstream 10.0kb downstream 12215 true A01: 2697982-2710196 Brassica rapa FPsc
Brara.A00548 10.0kb downstream 10.0kb downstream 10000 false A01: 2697982-2707981 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361562 5261 Brassicaceae View MSA
123838916 5264 Brassicales-Malvales View MSA
124348539 5266 SBM View MSA
124243904 5268 Malvidae View MSA
124066388 5270 Rosid View MSA
123750280 5271 Pentapetalae View MSA
122796437 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier