Gene : Brara.A00436 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  436
Name:  ? Brara.A00436 Secondary Identifier:  ? PAC:30636829
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5097 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-724 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00436 0.5kb upstream 0.5kb upstream 3567 true A01: 2147566-2151132 Brassica rapa FPsc
Brara.A00436 0.5kb upstream 0.5kb upstream 500 false A01: 2147566-2148065 Brassica rapa FPsc
Brara.A00436 0.5kb downstream 0.5kb downstream 3567 true A01: 2148066-2151632 Brassica rapa FPsc
Brara.A00436 0.5kb downstream 0.5kb downstream 500 false A01: 2151133-2151632 Brassica rapa FPsc
Brara.A00436 1.0kb upstream 1.0kb upstream 4067 true A01: 2147066-2151132 Brassica rapa FPsc
Brara.A00436 1.0kb upstream 1.0kb upstream 1000 false A01: 2147066-2148065 Brassica rapa FPsc
Brara.A00436 1.0kb downstream 1.0kb downstream 4067 true A01: 2148066-2152132 Brassica rapa FPsc
Brara.A00436 1.0kb downstream 1.0kb downstream 1000 false A01: 2151133-2152132 Brassica rapa FPsc
Brara.A00436 2.0kb upstream 2.0kb upstream 5067 true A01: 2146066-2151132 Brassica rapa FPsc
Brara.A00436 2.0kb upstream 2.0kb upstream 2000 false A01: 2146066-2148065 Brassica rapa FPsc
Brara.A00436 2.0kb downstream 2.0kb downstream 5067 true A01: 2148066-2153132 Brassica rapa FPsc
Brara.A00436 2.0kb downstream 2.0kb downstream 2000 false A01: 2151133-2153132 Brassica rapa FPsc
Brara.A00436 5.0kb upstream 5.0kb upstream 8067 true A01: 2143066-2151132 Brassica rapa FPsc
Brara.A00436 5.0kb upstream 5.0kb upstream 5000 false A01: 2143066-2148065 Brassica rapa FPsc
Brara.A00436 5.0kb downstream 5.0kb downstream 8067 true A01: 2148066-2156132 Brassica rapa FPsc
Brara.A00436 5.0kb downstream 5.0kb downstream 5000 false A01: 2151133-2156132 Brassica rapa FPsc
Brara.A00436 10.0kb upstream 10.0kb upstream 13067 true A01: 2138066-2151132 Brassica rapa FPsc
Brara.A00436 10.0kb upstream 10.0kb upstream 10000 false A01: 2138066-2148065 Brassica rapa FPsc
Brara.A00436 10.0kb downstream 10.0kb downstream 13067 true A01: 2148066-2161132 Brassica rapa FPsc
Brara.A00436 10.0kb downstream 10.0kb downstream 10000 false A01: 2151133-2161132 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352283 5261 Brassicaceae Singleton cluster - no MSA
123791040 5264 Brassicales-Malvales Singleton cluster - no MSA
124288968 5266 SBM Singleton cluster - no MSA
124142387 5268 Malvidae Singleton cluster - no MSA
124071170 5270 Rosid View MSA
123740014 5271 Pentapetalae View MSA
122788260 5272 Eudicot View MSA
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier