Gene : Bostr.26833s0936 B. stricta v1.2

Defline:  (1 of 2) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  936
Name:  ? Bostr.26833s0936 Secondary Identifier:  ? PAC:30652710

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLUGLNSYN-PWY Boechera stricta pathologic  
Bstricta PWY-3282 Boechera stricta pathologic  
Bstricta PWY-6963 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0936 0.5kb upstream 0.5kb upstream 10565 true Scaffold26833: 5311342-5321906 Boechera stricta
Bostr.26833s0936 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 5321407-5321906 Boechera stricta
Bostr.26833s0936 0.5kb downstream 0.5kb downstream 10565 true Scaffold26833: 5310842-5321406 Boechera stricta
Bostr.26833s0936 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 5310842-5311341 Boechera stricta
Bostr.26833s0936 1.0kb upstream 1.0kb upstream 11065 true Scaffold26833: 5311342-5322406 Boechera stricta
Bostr.26833s0936 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 5321407-5322406 Boechera stricta
Bostr.26833s0936 1.0kb downstream 1.0kb downstream 11065 true Scaffold26833: 5310342-5321406 Boechera stricta
Bostr.26833s0936 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 5310342-5311341 Boechera stricta
Bostr.26833s0936 2.0kb upstream 2.0kb upstream 12065 true Scaffold26833: 5311342-5323406 Boechera stricta
Bostr.26833s0936 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 5321407-5323406 Boechera stricta
Bostr.26833s0936 2.0kb downstream 2.0kb downstream 12065 true Scaffold26833: 5309342-5321406 Boechera stricta
Bostr.26833s0936 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 5309342-5311341 Boechera stricta
Bostr.26833s0936 5.0kb upstream 5.0kb upstream 15065 true Scaffold26833: 5311342-5326406 Boechera stricta
Bostr.26833s0936 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 5321407-5326406 Boechera stricta
Bostr.26833s0936 5.0kb downstream 5.0kb downstream 15065 true Scaffold26833: 5306342-5321406 Boechera stricta
Bostr.26833s0936 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 5306342-5311341 Boechera stricta
Bostr.26833s0936 10.0kb upstream 10.0kb upstream 20065 true Scaffold26833: 5311342-5331406 Boechera stricta
Bostr.26833s0936 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 5321407-5331406 Boechera stricta
Bostr.26833s0936 10.0kb downstream 10.0kb downstream 20065 true Scaffold26833: 5301342-5321406 Boechera stricta
Bostr.26833s0936 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 5301342-5311341 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366728 5261 Brassicaceae View MSA
123832225 5264 Brassicales-Malvales View MSA
124341222 5266 SBM View MSA
124241008 5268 Malvidae View MSA
124067049 5270 Rosid View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain