Gene : Bostr.26833s0871 B. stricta v1.2
Defline:  (1 of 1) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase Genomic Order:  871
Name:  ? Bostr.26833s0871 Secondary Identifier:  ? PAC:30652738
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TYRFUMCAT-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0871 0.5kb upstream 0.5kb upstream 3279 true Scaffold26833: 4882150-4885428 Boechera stricta
Bostr.26833s0871 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 4884929-4885428 Boechera stricta
Bostr.26833s0871 0.5kb downstream 0.5kb downstream 3279 true Scaffold26833: 4881650-4884928 Boechera stricta
Bostr.26833s0871 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 4881650-4882149 Boechera stricta
Bostr.26833s0871 1.0kb upstream 1.0kb upstream 3779 true Scaffold26833: 4882150-4885928 Boechera stricta
Bostr.26833s0871 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 4884929-4885928 Boechera stricta
Bostr.26833s0871 1.0kb downstream 1.0kb downstream 3779 true Scaffold26833: 4881150-4884928 Boechera stricta
Bostr.26833s0871 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 4881150-4882149 Boechera stricta
Bostr.26833s0871 2.0kb upstream 2.0kb upstream 4779 true Scaffold26833: 4882150-4886928 Boechera stricta
Bostr.26833s0871 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 4884929-4886928 Boechera stricta
Bostr.26833s0871 2.0kb downstream 2.0kb downstream 4779 true Scaffold26833: 4880150-4884928 Boechera stricta
Bostr.26833s0871 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 4880150-4882149 Boechera stricta
Bostr.26833s0871 5.0kb upstream 5.0kb upstream 7779 true Scaffold26833: 4882150-4889928 Boechera stricta
Bostr.26833s0871 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 4884929-4889928 Boechera stricta
Bostr.26833s0871 5.0kb downstream 5.0kb downstream 7779 true Scaffold26833: 4877150-4884928 Boechera stricta
Bostr.26833s0871 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 4877150-4882149 Boechera stricta
Bostr.26833s0871 10.0kb upstream 10.0kb upstream 12779 true Scaffold26833: 4882150-4894928 Boechera stricta
Bostr.26833s0871 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 4884929-4894928 Boechera stricta
Bostr.26833s0871 10.0kb downstream 10.0kb downstream 12779 true Scaffold26833: 4872150-4884928 Boechera stricta
Bostr.26833s0871 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 4872150-4882149 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373163 5261 Brassicaceae View MSA
123829499 5264 Brassicales-Malvales View MSA
124338204 5266 SBM View MSA
124236984 5268 Malvidae View MSA
124064618 5270 Rosid View MSA
123740810 5271 Pentapetalae View MSA
122786399 5272 Eudicot View MSA
122042428 5273 Angiosperm View MSA
121346859 5274 Embryophyte View MSA
123424235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain