Gene : Bostr.26833s0785 B. stricta v1.2
Defline:  (1 of 2) PTHR10314:SF98 - TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED Genomic Order:  785
Name:  ? Bostr.26833s0785 Secondary Identifier:  ? PAC:30652700
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRPSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26833s0785 0.5kb upstream 0.5kb upstream 2777 true Scaffold26833: 4124176-4126952 Boechera stricta
Bostr.26833s0785 0.5kb upstream 0.5kb upstream 500 false Scaffold26833: 4124176-4124675 Boechera stricta
Bostr.26833s0785 0.5kb downstream 0.5kb downstream 2777 true Scaffold26833: 4124676-4127452 Boechera stricta
Bostr.26833s0785 0.5kb downstream 0.5kb downstream 500 false Scaffold26833: 4126953-4127452 Boechera stricta
Bostr.26833s0785 1.0kb upstream 1.0kb upstream 3277 true Scaffold26833: 4123676-4126952 Boechera stricta
Bostr.26833s0785 1.0kb upstream 1.0kb upstream 1000 false Scaffold26833: 4123676-4124675 Boechera stricta
Bostr.26833s0785 1.0kb downstream 1.0kb downstream 3277 true Scaffold26833: 4124676-4127952 Boechera stricta
Bostr.26833s0785 1.0kb downstream 1.0kb downstream 1000 false Scaffold26833: 4126953-4127952 Boechera stricta
Bostr.26833s0785 2.0kb upstream 2.0kb upstream 4277 true Scaffold26833: 4122676-4126952 Boechera stricta
Bostr.26833s0785 2.0kb upstream 2.0kb upstream 2000 false Scaffold26833: 4122676-4124675 Boechera stricta
Bostr.26833s0785 2.0kb downstream 2.0kb downstream 4277 true Scaffold26833: 4124676-4128952 Boechera stricta
Bostr.26833s0785 2.0kb downstream 2.0kb downstream 2000 false Scaffold26833: 4126953-4128952 Boechera stricta
Bostr.26833s0785 5.0kb upstream 5.0kb upstream 7277 true Scaffold26833: 4119676-4126952 Boechera stricta
Bostr.26833s0785 5.0kb upstream 5.0kb upstream 5000 false Scaffold26833: 4119676-4124675 Boechera stricta
Bostr.26833s0785 5.0kb downstream 5.0kb downstream 7277 true Scaffold26833: 4124676-4131952 Boechera stricta
Bostr.26833s0785 5.0kb downstream 5.0kb downstream 5000 false Scaffold26833: 4126953-4131952 Boechera stricta
Bostr.26833s0785 10.0kb upstream 10.0kb upstream 12277 true Scaffold26833: 4114676-4126952 Boechera stricta
Bostr.26833s0785 10.0kb upstream 10.0kb upstream 10000 false Scaffold26833: 4114676-4124675 Boechera stricta
Bostr.26833s0785 10.0kb downstream 10.0kb downstream 12277 true Scaffold26833: 4124676-4136952 Boechera stricta
Bostr.26833s0785 10.0kb downstream 10.0kb downstream 10000 false Scaffold26833: 4126953-4136952 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364705 5261 Brassicaceae View MSA
123837173 5264 Brassicales-Malvales View MSA
124344388 5266 SBM View MSA
124250400 5268 Malvidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain