Gene : Bostr.26959s0381 B. stricta v1.2
Defline:  (1 of 2) PTHR15184:SF43 - ATP SYNTHASE SUBUNIT BETA, CHLOROPLASTIC Genomic Order:  381
Name:  ? Bostr.26959s0381 Secondary Identifier:  ? PAC:30670967
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6126 Boechera stricta pathologic  
Bstricta PWY-7219 Boechera stricta pathologic  
Bstricta PWY-7229 Boechera stricta pathologic  
Bstricta PWY-841 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.26959s0381 0.5kb upstream 0.5kb upstream 710 true Scaffold26959: 3843902-3844611 Boechera stricta
Bostr.26959s0381 0.5kb upstream 0.5kb upstream 500 false Scaffold26959: 3844112-3844611 Boechera stricta
Bostr.26959s0381 0.5kb downstream 0.5kb downstream 710 true Scaffold26959: 3843402-3844111 Boechera stricta
Bostr.26959s0381 0.5kb downstream 0.5kb downstream 500 false Scaffold26959: 3843402-3843901 Boechera stricta
Bostr.26959s0381 1.0kb upstream 1.0kb upstream 1210 true Scaffold26959: 3843902-3845111 Boechera stricta
Bostr.26959s0381 1.0kb upstream 1.0kb upstream 1000 false Scaffold26959: 3844112-3845111 Boechera stricta
Bostr.26959s0381 1.0kb downstream 1.0kb downstream 1210 true Scaffold26959: 3842902-3844111 Boechera stricta
Bostr.26959s0381 1.0kb downstream 1.0kb downstream 1000 false Scaffold26959: 3842902-3843901 Boechera stricta
Bostr.26959s0381 2.0kb upstream 2.0kb upstream 2210 true Scaffold26959: 3843902-3846111 Boechera stricta
Bostr.26959s0381 2.0kb upstream 2.0kb upstream 2000 false Scaffold26959: 3844112-3846111 Boechera stricta
Bostr.26959s0381 2.0kb downstream 2.0kb downstream 2210 true Scaffold26959: 3841902-3844111 Boechera stricta
Bostr.26959s0381 2.0kb downstream 2.0kb downstream 2000 false Scaffold26959: 3841902-3843901 Boechera stricta
Bostr.26959s0381 5.0kb upstream 5.0kb upstream 5210 true Scaffold26959: 3843902-3849111 Boechera stricta
Bostr.26959s0381 5.0kb upstream 5.0kb upstream 5000 false Scaffold26959: 3844112-3849111 Boechera stricta
Bostr.26959s0381 5.0kb downstream 5.0kb downstream 5210 true Scaffold26959: 3838902-3844111 Boechera stricta
Bostr.26959s0381 5.0kb downstream 5.0kb downstream 5000 false Scaffold26959: 3838902-3843901 Boechera stricta
Bostr.26959s0381 10.0kb upstream 10.0kb upstream 10210 true Scaffold26959: 3843902-3854111 Boechera stricta
Bostr.26959s0381 10.0kb upstream 10.0kb upstream 10000 false Scaffold26959: 3844112-3854111 Boechera stricta
Bostr.26959s0381 10.0kb downstream 10.0kb downstream 10210 true Scaffold26959: 3833902-3844111 Boechera stricta
Bostr.26959s0381 10.0kb downstream 10.0kb downstream 10000 false Scaffold26959: 3833902-3843901 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779602 5273 Angiosperm View MSA
122341579 5261 Brassicaceae Singleton cluster - no MSA
123781962 5264 Brassicales-Malvales Singleton cluster - no MSA
124280241 5266 SBM Singleton cluster - no MSA
124252301 5268 Malvidae View MSA
123952727 5270 Rosid View MSA
123743462 5271 Pentapetalae View MSA
122770668 5272 Eudicot View MSA
121051254 5274 Embryophyte View MSA
123091353 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain