Gene : Bostr.27991s0119 B. stricta v1.2
Defline:  (1 of 2) PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Genomic Order:  119
Name:  ? Bostr.27991s0119 Secondary Identifier:  ? PAC:30677711
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5980 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.27991s0119 0.5kb upstream 0.5kb upstream 2634 true Scaffold27991: 1293409-1296042 Boechera stricta
Bostr.27991s0119 0.5kb upstream 0.5kb upstream 500 false Scaffold27991: 1293409-1293908 Boechera stricta
Bostr.27991s0119 0.5kb downstream 0.5kb downstream 2634 true Scaffold27991: 1293909-1296542 Boechera stricta
Bostr.27991s0119 0.5kb downstream 0.5kb downstream 500 false Scaffold27991: 1296043-1296542 Boechera stricta
Bostr.27991s0119 1.0kb upstream 1.0kb upstream 3134 true Scaffold27991: 1292909-1296042 Boechera stricta
Bostr.27991s0119 1.0kb upstream 1.0kb upstream 1000 false Scaffold27991: 1292909-1293908 Boechera stricta
Bostr.27991s0119 1.0kb downstream 1.0kb downstream 3134 true Scaffold27991: 1293909-1297042 Boechera stricta
Bostr.27991s0119 1.0kb downstream 1.0kb downstream 1000 false Scaffold27991: 1296043-1297042 Boechera stricta
Bostr.27991s0119 2.0kb upstream 2.0kb upstream 4134 true Scaffold27991: 1291909-1296042 Boechera stricta
Bostr.27991s0119 2.0kb upstream 2.0kb upstream 2000 false Scaffold27991: 1291909-1293908 Boechera stricta
Bostr.27991s0119 2.0kb downstream 2.0kb downstream 4134 true Scaffold27991: 1293909-1298042 Boechera stricta
Bostr.27991s0119 2.0kb downstream 2.0kb downstream 2000 false Scaffold27991: 1296043-1298042 Boechera stricta
Bostr.27991s0119 5.0kb upstream 5.0kb upstream 7134 true Scaffold27991: 1288909-1296042 Boechera stricta
Bostr.27991s0119 5.0kb upstream 5.0kb upstream 5000 false Scaffold27991: 1288909-1293908 Boechera stricta
Bostr.27991s0119 5.0kb downstream 5.0kb downstream 7134 true Scaffold27991: 1293909-1301042 Boechera stricta
Bostr.27991s0119 5.0kb downstream 5.0kb downstream 5000 false Scaffold27991: 1296043-1301042 Boechera stricta
Bostr.27991s0119 10.0kb upstream 10.0kb upstream 12134 true Scaffold27991: 1283909-1296042 Boechera stricta
Bostr.27991s0119 10.0kb upstream 10.0kb upstream 10000 false Scaffold27991: 1283909-1293908 Boechera stricta
Bostr.27991s0119 10.0kb downstream 10.0kb downstream 12134 true Scaffold27991: 1293909-1306042 Boechera stricta
Bostr.27991s0119 10.0kb downstream 10.0kb downstream 10000 false Scaffold27991: 1296043-1306042 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377762 5261 Brassicaceae View MSA
123836741 5264 Brassicales-Malvales View MSA
124339528 5266 SBM View MSA
124254055 5268 Malvidae View MSA
124063526 5270 Rosid View MSA
123741698 5271 Pentapetalae View MSA
122788923 5272 Eudicot View MSA
122042963 5273 Angiosperm View MSA
121350379 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain