Gene : Bostr.27991s0133 B. stricta v1.2

Defline:  (1 of 3) PTHR23415 - CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 Genomic Order:  133
Name:  ? Bostr.27991s0133 Secondary Identifier:  ? PAC:30677704

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.27991s0133 0.5kb upstream 0.5kb upstream 1897 true Scaffold27991: 1435463-1437359 Boechera stricta
Bostr.27991s0133 0.5kb upstream 0.5kb upstream 500 false Scaffold27991: 1435463-1435962 Boechera stricta
Bostr.27991s0133 0.5kb downstream 0.5kb downstream 1897 true Scaffold27991: 1435963-1437859 Boechera stricta
Bostr.27991s0133 0.5kb downstream 0.5kb downstream 500 false Scaffold27991: 1437360-1437859 Boechera stricta
Bostr.27991s0133 1.0kb upstream 1.0kb upstream 2397 true Scaffold27991: 1434963-1437359 Boechera stricta
Bostr.27991s0133 1.0kb upstream 1.0kb upstream 1000 false Scaffold27991: 1434963-1435962 Boechera stricta
Bostr.27991s0133 1.0kb downstream 1.0kb downstream 2397 true Scaffold27991: 1435963-1438359 Boechera stricta
Bostr.27991s0133 1.0kb downstream 1.0kb downstream 1000 false Scaffold27991: 1437360-1438359 Boechera stricta
Bostr.27991s0133 2.0kb upstream 2.0kb upstream 3397 true Scaffold27991: 1433963-1437359 Boechera stricta
Bostr.27991s0133 2.0kb upstream 2.0kb upstream 2000 false Scaffold27991: 1433963-1435962 Boechera stricta
Bostr.27991s0133 2.0kb downstream 2.0kb downstream 3397 true Scaffold27991: 1435963-1439359 Boechera stricta
Bostr.27991s0133 2.0kb downstream 2.0kb downstream 2000 false Scaffold27991: 1437360-1439359 Boechera stricta
Bostr.27991s0133 5.0kb upstream 5.0kb upstream 6397 true Scaffold27991: 1430963-1437359 Boechera stricta
Bostr.27991s0133 5.0kb upstream 5.0kb upstream 5000 false Scaffold27991: 1430963-1435962 Boechera stricta
Bostr.27991s0133 5.0kb downstream 5.0kb downstream 6397 true Scaffold27991: 1435963-1442359 Boechera stricta
Bostr.27991s0133 5.0kb downstream 5.0kb downstream 5000 false Scaffold27991: 1437360-1442359 Boechera stricta
Bostr.27991s0133 10.0kb upstream 10.0kb upstream 11397 true Scaffold27991: 1425963-1437359 Boechera stricta
Bostr.27991s0133 10.0kb upstream 10.0kb upstream 10000 false Scaffold27991: 1425963-1435962 Boechera stricta
Bostr.27991s0133 10.0kb downstream 10.0kb downstream 11397 true Scaffold27991: 1435963-1447359 Boechera stricta
Bostr.27991s0133 10.0kb downstream 10.0kb downstream 10000 false Scaffold27991: 1437360-1447359 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502810 5273 Angiosperm View MSA
122343708 5261 Brassicaceae View MSA
123783823 5264 Brassicales-Malvales View MSA
124282036 5266 SBM View MSA
124136698 5268 Malvidae View MSA
123864515 5270 Rosid View MSA
123449818 5271 Pentapetalae View MSA
122485347 5272 Eudicot View MSA
121351366 5274 Embryophyte View MSA
123427674 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain