Gene : Bostr.2902s0364 B. stricta v1.2
Defline:  (1 of 1) PTHR30239:SF6 - ACETOLACTATE SYNTHASE SMALL SUBUNIT 1, CHLOROPLASTIC Genomic Order:  364
Name:  ? Bostr.2902s0364 Secondary Identifier:  ? PAC:30655724
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta BRANCHED-CHAIN-AA-SYN-PWY Boechera stricta pathologic  
Bstricta ILEUSYN-PWY Boechera stricta pathologic  
Bstricta PWY-3001 Boechera stricta pathologic  
Bstricta VALSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2902s0364 0.5kb upstream 0.5kb upstream 4778 true Scaffold2902: 1753574-1758351 Boechera stricta
Bostr.2902s0364 0.5kb upstream 0.5kb upstream 500 false Scaffold2902: 1753574-1754073 Boechera stricta
Bostr.2902s0364 0.5kb downstream 0.5kb downstream 4778 true Scaffold2902: 1754074-1758851 Boechera stricta
Bostr.2902s0364 0.5kb downstream 0.5kb downstream 500 false Scaffold2902: 1758352-1758851 Boechera stricta
Bostr.2902s0364 1.0kb upstream 1.0kb upstream 5278 true Scaffold2902: 1753074-1758351 Boechera stricta
Bostr.2902s0364 1.0kb upstream 1.0kb upstream 1000 false Scaffold2902: 1753074-1754073 Boechera stricta
Bostr.2902s0364 1.0kb downstream 1.0kb downstream 5278 true Scaffold2902: 1754074-1759351 Boechera stricta
Bostr.2902s0364 1.0kb downstream 1.0kb downstream 1000 false Scaffold2902: 1758352-1759351 Boechera stricta
Bostr.2902s0364 2.0kb upstream 2.0kb upstream 6278 true Scaffold2902: 1752074-1758351 Boechera stricta
Bostr.2902s0364 2.0kb upstream 2.0kb upstream 2000 false Scaffold2902: 1752074-1754073 Boechera stricta
Bostr.2902s0364 2.0kb downstream 2.0kb downstream 6278 true Scaffold2902: 1754074-1760351 Boechera stricta
Bostr.2902s0364 2.0kb downstream 2.0kb downstream 2000 false Scaffold2902: 1758352-1760351 Boechera stricta
Bostr.2902s0364 5.0kb upstream 5.0kb upstream 9278 true Scaffold2902: 1749074-1758351 Boechera stricta
Bostr.2902s0364 5.0kb upstream 5.0kb upstream 5000 false Scaffold2902: 1749074-1754073 Boechera stricta
Bostr.2902s0364 5.0kb downstream 5.0kb downstream 9278 true Scaffold2902: 1754074-1763351 Boechera stricta
Bostr.2902s0364 5.0kb downstream 5.0kb downstream 5000 false Scaffold2902: 1758352-1763351 Boechera stricta
Bostr.2902s0364 10.0kb upstream 10.0kb upstream 14278 true Scaffold2902: 1744074-1758351 Boechera stricta
Bostr.2902s0364 10.0kb upstream 10.0kb upstream 10000 false Scaffold2902: 1744074-1754073 Boechera stricta
Bostr.2902s0364 10.0kb downstream 10.0kb downstream 14278 true Scaffold2902: 1754074-1768351 Boechera stricta
Bostr.2902s0364 10.0kb downstream 10.0kb downstream 10000 false Scaffold2902: 1758352-1768351 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
122368277 5261 Brassicaceae View MSA
123831062 5264 Brassicales-Malvales View MSA
124348277 5266 SBM View MSA
124249637 5268 Malvidae View MSA
124071957 5270 Rosid View MSA
123740073 5271 Pentapetalae View MSA
122796860 5272 Eudicot View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain