Gene : Bostr.29505s0013 B. stricta v1.2
Defline:  (1 of 1) PTHR22603:SF24 - PROTEIN CKA-1, ISOFORM A Genomic Order:  13
Name:  ? Bostr.29505s0013 Secondary Identifier:  ? PAC:30675304
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3385 Boechera stricta pathologic  
Bstricta PWY4FS-6 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.29505s0013 0.5kb upstream 0.5kb upstream 4553 true Scaffold29505: 157571-162123 Boechera stricta
Bostr.29505s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold29505: 157571-158070 Boechera stricta
Bostr.29505s0013 0.5kb downstream 0.5kb downstream 4553 true Scaffold29505: 158071-162623 Boechera stricta
Bostr.29505s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold29505: 162124-162623 Boechera stricta
Bostr.29505s0013 1.0kb upstream 1.0kb upstream 5053 true Scaffold29505: 157071-162123 Boechera stricta
Bostr.29505s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold29505: 157071-158070 Boechera stricta
Bostr.29505s0013 1.0kb downstream 1.0kb downstream 5053 true Scaffold29505: 158071-163123 Boechera stricta
Bostr.29505s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold29505: 162124-163123 Boechera stricta
Bostr.29505s0013 2.0kb upstream 2.0kb upstream 6053 true Scaffold29505: 156071-162123 Boechera stricta
Bostr.29505s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold29505: 156071-158070 Boechera stricta
Bostr.29505s0013 2.0kb downstream 2.0kb downstream 6053 true Scaffold29505: 158071-164123 Boechera stricta
Bostr.29505s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold29505: 162124-164123 Boechera stricta
Bostr.29505s0013 5.0kb upstream 5.0kb upstream 9053 true Scaffold29505: 153071-162123 Boechera stricta
Bostr.29505s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold29505: 153071-158070 Boechera stricta
Bostr.29505s0013 5.0kb downstream 5.0kb downstream 9053 true Scaffold29505: 158071-167123 Boechera stricta
Bostr.29505s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold29505: 162124-167123 Boechera stricta
Bostr.29505s0013 10.0kb upstream 10.0kb upstream 14053 true Scaffold29505: 148071-162123 Boechera stricta
Bostr.29505s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold29505: 148071-158070 Boechera stricta
Bostr.29505s0013 10.0kb downstream 10.0kb downstream 14053 true Scaffold29505: 158071-172123 Boechera stricta
Bostr.29505s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold29505: 162124-172123 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362020 5261 Brassicaceae View MSA
123831797 5264 Brassicales-Malvales View MSA
124338804 5266 SBM View MSA
124248672 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain